KEGG   Toxoplasma gondii: TGME49_205010
Entry
TGME49_205010     CDS       T01093                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein family protein, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_205010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgo03041]
    TGME49_205010
   03036 Chromosome and associated proteins [BR:tgo03036]
    TGME49_205010
Spliceosome [BR:tgo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TGME49_205010
 Complex B
    TGME49_205010
 Complex C
   U2 SnRNP specific factors
    TGME49_205010
Chromosome and associated proteins [BR:tgo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    TGME49_205010
SSDB
Motif
Pfam: SF3b1 TOR1L1_N PPP2R1A-like_HEAT HEAT_EZ HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 Adaptin_N XMAP215_CLASP_TOG DUF5742
Other DBs
NCBI-GeneID: 7894410
NCBI-ProteinID: XP_002367733
UniProt: S8F8W2
LinkDB
Position
VIIa:complement(join(1671126..1671260,1671628..1671723,1672037..1672128,1672416..1673043,1673304..1673676,1674070..1674265,1674710..1675218,1675753..1676000,1676468..1676638,1676917..1677380,1677862..1678219,1678673..1679563))
AA seq 1386 aa
MENNGSSGKNQPSSTAAATDSAGVAFDSHIYGETPAAHYVTEIDAETPLVAQDGGSGSAV
SRASRSGQRSTEDGARIAERERMLMAQQGDGVEATGVDKSIAAREDFYRRQRFQRALSPE
RADPFSDGDLGAASRGESARTYADVMLEQHLDREKQAAVRQIRKLQEDAELQRQLQMQKQ
LGGGDGSEKKRRRWDWGTAGAEDEGLTEAERQELARAKAQGGGKSEEGAAAAAAALVSRW
DTPLHAGGQTPGAWGETPLVAGSDSREGAGARTGLGAAPGKKKSRWDATPTIGGTGQETP
TPGQWGATPAVDQAGTPILAGAGSVTPMAPGAGSGNVTPMIAPGSQTPSMGRKRSRWDAT
PVLGGSDADMAAAAAAGLTPGASTPMTGGAGMTPGKDGSTPMTSQLTPGMTPLAVTGMVG
ATPLTPGTPISTAEQLLQLRMQQEQDERTRYLTDEELDRLLPKEGYEIVPPPADYNPPPS
SAAAAAARARHQAIGMTPGVAATPTPIGVTPLYTMPEEGVIPGGMEGLMTMGGGIGGQLT
AEGGGVTMKAEDYQFFAKLFEDKDEDAMTQEEVKERKIQLLLLKIKNGTPPLRRSALRTL
TEKSKEFGAAALFNQILPLMMQSTLEDQERHLLVKVIDRVLYRLDDAVRPYVHKILVVIE
PLLIDEDYYARIEGREIISNLAKAAGLATMIATMRPDIDHPDEYVRNTTARAFAVVASAL
GIPSLILFLKAVCQSKKSWQARHTGIKIIQQMSILMGCGVLPHLKQLVEIIQHGLDDQVL
KVKTVTALALAALAESAAPYGIEAFDSVLRPLWKGMGEMRGKGLAAYLKAIGSIIPLMDA
YHASYYTREVMVMLVREFETNDEEMKKIVLRVVRQCVATEGVESEYIRTDIVPPFFAKVW
LVRNALDRRTAKLLIETVVEIANKAGGAHIIQQIVEDLKDPSEPFRKVTLEALEQIIVNN
GVVDVDNRLEEQLVDGLLYAFQEQTSEDATALLNGFSTIVNALGTRIKPYLPQICGVIRW
RLNTPSAKLRQQAADLIARIAVVMQKCGEEQMLGHLGLFLYEYLGEEYPEVLGSILGALK
AIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENVIDLVGRIADRGGDLVSPKEWDRI
CFDLLDMLKASKKAIRRATVNTFGYIARTIGPQDVLATLLNNLKVQERQLRLCTTIAIAI
VAETCLPYSVLPALMNEYRVQELNVQNGVLKTLSFMFEYIGEMAKDYIYTVVPLLEDALM
DRDLVHRQTAAWATKHLALGVHGLSCEDALLHLMNFVWPNIFEKSPHLVQAFFDAVDGMR
VSLGAGIVFRYVLLGLFHPAKKVREVYWRVYNNLYIGHQDSMVAFYPPLPDDEKGCYSRD
ELLYVI
NT seq 4161 nt   +upstreamnt  +downstreamnt
atggagaacaacggaagcagtgggaagaaccagccgtcgtcaacggcggcggcgacggac
agtgcaggcgtcgcctttgactcgcatatttacggcgagacgccggcggcgcattacgtg
acagaaatcgacgcagagacgcctttggtggcacaagatggcggctcgggttcggcggtg
tctcgcgcgagccgcagcggccaacgctcgacggaagatggggcgcggatcgcggagcgc
gagcgcatgctgatggctcagcagggcgacggcgtggaggcgactggggtagacaagtcg
atcgccgcccgcgaagacttttaccgccggcagcgcttccagcgagcgctctcccccgag
cgtgcggatcccttctccgacggcgacctgggcgcggcgtcccgcggcgagagcgcgcgt
acctacgccgacgtgatgctcgagcagcacttggaccgcgagaagcaagcagctgtgcga
caaatccgcaaactgcaagaggacgcggagctccagaggcagcttcagatgcagaagcag
ctcggcggaggggacggctccgaaaagaagcgcagaaggtgggactggggcaccgccggc
gcggaggacgaaggcctcacagaggctgagcgccaagaactcgctcgtgccaaggcgcag
ggcggcggcaagagcgaagaaggagccgcggctgcggcggcggccctcgtcagccgctgg
gatacgccgctccatgccggtggacagacccccggcgcgtggggagaaacgccgctcgtc
gcaggcagcgacagccgagaaggtgcgggcgccagaacaggcctaggtgcggcgcccggc
aaaaagaaaagcagatgggatgcaacgcccacgatcggaggcactggacaggaaactccc
actcctgggcagtggggagcgacccccgcggtcgaccaagcagggactccgattcttgct
ggcgcgggcagcgtcacgcccatggcgcctggcgctggttctggcaacgtgaccccgatg
atcgctccagggtctcagacgcccagcatgggtcggaagcgaagtcgctgggacgcgacg
ccggttctcggcggctcggacgcagacatggcggcggccgctgctgcggggctgacccct
ggagcatcgacgcccatgacgggtggcgccggcatgacccccgggaaggacggcagcacg
ccgatgacgagtcagctgactcctggaatgacgcctctggcggtcactggcatggtaggc
gcgacaccgttgactccgggaactcctatctccacagcggagcagcttctccagctgcgc
atgcagcaggagcaggacgaacgcacgcggtatttgactgacgaagagttagataggtta
cttcccaaagagggctacgaaatcgtcccgccgcccgcggactacaacccgccgccgtct
tctgctgcggcagcggcagctcgagcgcgacaccaagccatcggcatgactccaggcgtg
gctgcgacgcctacgcccatcggagtgacgcctctgtacacgatgcctgaggagggagtg
attcctggcggcatggagggcctcatgacgatggggggtggcatcggtggccagctgacg
gctgagggaggcggcgtgacgatgaaggctgaggattaccagttctttgcgaaactcttc
gaagacaaagacgaggacgcaatgacacaagaggaggtgaaggaacgcaagattcagctg
cttttgttgaagatcaagaacggcacccctccgcttcgtcgatctgctctgcgcacgctg
acggagaagtccaaggaattcggcgccgctgcgctttttaatcagattctccctctcatg
atgcagagcaccctggaagaccaggaacggcatctgctcgtcaaagtcattgatcgcgta
ctgtaccgcctggacgacgctgtccgcccgtacgtccacaaaattcttgtcgttattgaa
cctctacttatcgacgaggactactacgctcgcattgagggcagagaaatcatttctaac
ttggcgaaggcggcgggtctcgcgacgatgattgccaccatgcgtcccgatatcgatcac
ccggatgaatacgttcgtaataccaccgcaagagccttcgccgtcgtggcgtccgcgttg
ggaattccgtcgctgattctttttctgaaggccgtgtgtcagtcgaagaagtcgtggcaa
gcgcgccacacgggcatcaagattatccagcagatgtccattctgatggggtgcggggtt
ttgccccatctgaagcagctcgtggaaattattcagcacgggctggacgaccaagttttg
aaggtcaagaccgtcacggctctggctctcgcggccttggccgagtctgcggcgccgtac
ggtatcgaagccttcgacagtgtcctcaggcctctttggaagggtatgggtgaaatgcgc
ggaaaaggtttggcggcgtacttgaaagctatcggttccattattccccttatggacgcc
taccacgcgagctactatacacgagaagttatggtcatgctggttcgagaattcgaaaca
aacgatgaagaaatgaaaaaaatcgtcctcagagtcgtccgacagtgcgtcgccacagaa
ggtgtggagagcgagtacattcgaacagatatcgtaccaccatttttcgcgaaggtttgg
ttggtgcgcaacgcactcgaccgccgtacagcgaagctcctcattgagaccgtcgtggaa
attgccaacaaagcaggaggcgctcacatcattcagcagattgttgaagacttgaaagac
ccaagtgaacctttcaggaaggtgacattggaggctctggaacagatcattgtgaacaac
ggcgttgtagacgtcgacaaccgcctggaggagcaactggttgatggtcttttgtacgcg
tttcaagagcagacgtcggaagatgcgacggctctgctgaacgggttttctaccatcgtc
aatgcattgggtacccgcatcaagccgtacctgcctcagatttgtggtgttatccgctgg
cgtctcaacacacccagtgcgaagctcaggcaacaggctgcagaccttattgcgcgcatt
gccgttgtcatgcagaagtgtggagaggagcagatgcttggtcatttgggtctgttcctt
tacgaatatctcggagaagaatacccggaggtcctaggtagcattttaggtgcactgaag
gcaattgtgaatgtcattggcatgaacaaaatgacaccgcccatcaaggatttgcttcca
cgtctcacgccgattctcaagaaccgtcacgagaaggtccaggagaacgttatcgacctc
gtgggacgcatcgccgatcgaggaggtgacttggtgtcacccaaggagtgggaccgcatc
tgcttcgacttgctagatatgctgaaggcgagcaagaaggccattcggcgagcgactgtc
aacaccttcggctacattgcgcggacaattggtccccaggatgtcctggctactctcttg
aacaacctgaaggtgcaagaacgccagctgcgtctatgcacgacgatcgctatcgccatc
gtggcggagacgtgtctgccgtactccgtgcttccggcgcttatgaacgaataccgcgtc
caggagctgaacgtacagaatggtgtcctcaaaactctttccttcatgttcgagtacatc
ggagaaatggccaaggattacatctacactgtggttcccttgcttgaagacgctctcatg
gaccgcgaccttgtccacaggcaaacggcggcttgggcaaccaagcacttggcactcggt
gtccatggtctcagttgcgaagatgcgcttctgcatctgatgaacttcgtctggccaaat
attttcgagaaatcgccgcatcttgtgcaggcttttttcgatgctgtcgacggcatgcgc
gtctcactgggtgccggcattgtatttcgatacgtccttttgggtctattccatccggcg
aaaaaggtgcgcgaagtgtactggcgagtgtacaacaatctttacattgggcatcaagac
tcgatggttgcgttctacccaccccttccggacgacgagaagggctgttattctcgagac
gaactgctgtatgttatttag

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