Toxoplasma gondii: TGME49_205540
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Entry
TGME49_205540 CDS
T01093
Name
(RefSeq) DEAD/DEAH box helicase domain-containing protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_205540
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_205540
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
Pre-60S particles
Helicases
TGME49_205540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
7894404
NCBI-ProteinID:
XP_002367785
UniProt:
S8GDR3
LinkDB
All DBs
Position
VIIa:join(1346394..1347722,1348736..1349172,1349667..1350015,1350231..1350434,1350944..1351036,1351177..1351490,1351953..1351993,1352497..1352565,1353040..1353413)
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AA seq
1069 aa
AA seq
DB search
MATGAGQAAATEPGALEQAKGEKTGGKRREKAPFASACDLANSGEASRRIGGENAGGKGG
DKRAEGAAASHGERGVHTPQLEGGALPEGKLASSASAQQVQQRVSSRFSSMACLSPLSQA
FLASMRFSFATPVQEACIPLLLAGVHTPGSSAPGASPKLLQRRDLAVEAPTGSGKTLAFV
LPVVERLLSRLRLYELARSSASPPPSSLGDLSELIWDRERRRRSLLDAPLSSSPSGESQE
SLAVEGASQKKRTAARGEVEAADDTARAPHSPEYVVFLNQVLERKPASTSSSPSSADGEG
ENSCRIGAVLLAPTRELARQIFSIVQSHVRFVEETVLLRFDAAAAHSSKESRKRRRAQTP
QGEEEEVIAAEADGEAGVSPGSFSPSSHAFFLQSILLTGGTRPLEADLRALERRASRRAL
FVLVATPGRLSRLVETERATREPLRWSFDELDVVVVDEADRLMDEQHTDELRNLLRYFRE
KKASAQTEKRLSAAAQAEAREDARLSFRVAVFSATLTGAMAEQSKTKDLWGIVKDPVCVR
VATPLASRISKAEQEKSACIQHDVPTTLSNFYAICDYDEKLPFLVDFIKTQIIPHNASCI
VFLLTCHCVEYFYGLLRALLLCPPSSSSSPSSSSSSPSASSAASSALPVQLSRLHGRMKQ
RARLAACKKFASSGKEPKVLLATDVAARGLDFPDVDWTLQLDPPQNPEVFVHRIGRAARA
GRSGCALLLLLPHEDAYLPFLKNRGLSIAAYANAERTVAKKEINEAAKNEVLQDRALVLK
SSKAFVSFVRAYKEHQLSFLLPFQNLDLGRLATAFALLRLPRMKEIVGRRISNFTQSAAD
PLKIPFRFDSAREAERLAGLSDALEQRAKRHTERERRRENARKKQSEKEARADLRNPHRT
KAEKRKVKRRNALDEWEELAFEERMARKLRKGKLSEVEYERELKKRGEQFADDFSDVSGG
DSEADSLADSDGIAGDEDPGCTDTGGRSSQGRRGSDASSVNEERADDCSDVSDFGDSLGG
ESDEKRPSSSRPGGEKNRRRGDGAPHKKPPKWIGTRGRKTKKKKWGKRK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggtgccggccaggccgcggcgacggagccgggcgctctggagcaggcgaaa
ggtgagaaaacgggaggcaaacgaagggaaaaggcacctttcgcttccgcatgtgacctc
gcaaactctggagaggcctcaaggcgtatcggcggagagaacgccggcggaaaaggcggc
gacaaacgcgcagagggtgccgcagctagccatggcgagcgaggtgtacatacacctcaa
ctcgagggcggcgctctgccggaaggcaaactcgcgtcttctgcttccgcgcagcaggtg
cagcagcgcgtgagctctcggttttcgtccatggcgtgtctctcgccgctgtcgcaggcc
ttcctcgcgtcgatgcgcttctccttcgcgacgcctgtgcaagaagcatgcatccctctg
ctcctcgcaggtgtacatacacctgggagctcggcacccggcgcgtctccgaagcttctc
cagcgcagggacctcgcagtcgaggcgcctacagggtcggggaagacgctcgccttcgtg
ttgccggtcgttgaacgcctgctcagccgccttcgtctgtacgaactcgcgcgctcttct
gcgtctcctcctccctcctctcttggagacctttcggagctcatctgggaccgagagcgc
cgccgccgctctctcctcgacgcgcctctctcgtcctcgccctctggggagagccaagag
tctcttgcggtggaaggcgcctcccagaagaaaaggacggcggcgcgaggcgaagtcgaa
gctgcagacgacaccgcgcgcgcgcctcactctccagagtacgtcgtttttctcaaccaa
gtcctcgaacgcaagcctgcctccacttcctcctccccttcttctgcagacggcgaggga
gagaactcttgtcgcatcggggcagtgctgctggcgcccacccgcgagctcgctcggcag
atcttcagcatcgtccagagccatgtccgattcgtcgaagagacggtcctgctccgcttc
gacgcagctgctgcacattcatccaaggagtctcggaagcgcagacgagcacaaactccg
cagggagaagaagaggaggtgattgcagcagaagcagacggggaagctggcgtttcgcct
gggagtttctcgccttcttctcatgccttctttcttcaaagcatactcttaacgggtggt
acgcgccctctggaggcagacttgagagctctcgagagacgcgccagccgtcgggcgctg
tttgttctggtggcaactccggggcgtctctcgcgactggttgaaacggagcgagcgact
cgcgaaccgttgcgctggtcctttgacgaactggacgtggtcgtcgtcgacgaagcagat
cggcttatggacgagcaacacacagacgagctgcggaacttgctgcgctactttcgcgag
aagaaggccagcgcccagaccgagaaacgtctctccgcggccgcgcaggccgaggcgcgt
gaagacgcgcgtttgagttttcgagttgctgttttttcagcgacacttacaggggcgatg
gcggagcagagcaagacgaaggacctctggggcatcgtgaaagatcctgtgtgcgtccgt
gtggctacgccgctggcctcacgcatctctaaagcggagcaagagaaatctgcatgcatt
caacacgacgtcccaacgacgctctccaacttctacgcgatctgcgactacgacgaaaaa
cttccttttctcgtcgacttcataaagacgcagatcattcctcacaacgcgagctgcatc
gtcttcctcctcacctgccactgcgtcgagtacttctacggcctcctccgtgctctcctt
ctctgccccccttcttcctcttcttccccttcttcctcttcttcttctccttctgcgtct
tctgccgcgtcttctgctttgcctgtgcagctgagtaggcttcacggtcggatgaagcag
cgcgcgcggttagctgcatgcaagaagttcgcttcctctgggaaagagccgaaggtgctc
ctggcgactgatgtagctgcgcgaggtctcgacttccccgacgtcgactggaccctgcag
ctcgaccccccgcagaacccagaggtgttcgtacaccgcatcggaagagccgcgcgcgca
ggacgttctggctgtgcgcttcttctgttgctaccacacgaagatgcgtatcttcccttc
ctcaagaaccgggggctgtcaatcgctgcgtacgcaaacgcagagcgaacagtcgcaaaa
aaagaaatcaacgaggccgcaaaaaatgaagtgctgcaggaccgcgcactcgttctgaaa
agttccaaggccttcgtctccttcgttcgcgcgtacaaggaacaccagctctccttcctt
ctgccctttcagaatctggatctcggacgcctcgcgaccgcctttgcgttgctgcgtttg
ccgcgcatgaaagagatcgtaggccgccgcatttccaacttcacacagagcgccgcagat
ccgctgaagattccttttcgattcgactccgcccgcgaggctgagcggctggctggactc
tcagacgccctcgagcagcgcgcgaagcgacacacagagagggaacgcagacgcgagaac
gcgagaaaaaaacaaagtgaaaaagaagcgcgagcagacctacgcaacccccaccgaacg
aaagccgaaaaacgaaaagtcaaaaggcgcaatgctttggacgagtgggaagagctcgct
ttcgaagaacgcatggctcgtaaactgaggaagggaaaactttcagaagttgagtacgaa
agggaactgaaaaagcgcggcgagcagtttgcggacgacttctcggacgtttctggaggc
gactcggaagcggactcgctggccgacagcgacggcatcgcgggagacgaggatccgggg
tgtacagacaccggagggcgttcgagccaggggaggcgagggtcggacgcgtcttcggtg
aacgaggagcgcgccgacgactgcagcgacgtgagcgacttcggcgacagtttgggcggc
gagtctgacgagaagaggccctcgagttcgaggcccggcggagaaaagaatcggcgacgc
ggagacggtgccccgcacaaaaaaccgccaaagtggattggcactcgaggccggaaaacc
aagaagaagaagtgggggaaacggaagtag
DBGET
integrated database retrieval system
