Toxoplasma gondii: TGME49_217540
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Entry
TGME49_217540 CDS
T01093
Name
(RefSeq) RNA recognition motif-containing protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_217540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_217540
Spliceosome [BR:
tgo03041
]
Common components
Common spliceosomal components
SR proteins
TGME49_217540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
7898529
NCBI-ProteinID:
XP_018634854
UniProt:
A0A125YG07
LinkDB
All DBs
Position
XII:complement(join(1896588..1897496,1898358..1898504))
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AA seq
351 aa
AA seq
DB search
MFGGDRSAAGGGGSGRIYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEY
ADPRDARDAIAQLHGRPPPGMRGAAPLRVEIPLARSSRPDGFGEEALPRGLAGRRGRFVL
EVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDG
STFRSHEGEKSRISVREKRAPGGRGGRSDDAHDAAAYDTDARGGRRTKYGSLYESSNGGY
STGGADAYRNSIEMMDPSSRGRSGGPGAGGYYGLHPTGSPSPPRGHAAYTENNRRGRSRS
GERGPPTRGAYGAYGPPASYYDRIGTSPRCPRLSMERGSRRFDDWTDRRRC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcggagacagaagcgccgccggaggtggtggcagcggacgaatatacatcgga
agcttacccggagagtatacggacaaagatgtggagcgcgagttcgaaaagttcggaaag
atcatcaaacttgaattcaaacgaacggtgtcaggtgccgggtactgtttcttagagtac
gcggatccgcgggacgcgagagacgcaattgctcagctgcacggtcggccgcccccaggc
atgcgcggcgcagcgcctctgcgcgtggaaattcccctagcgcgttcaagccgccctgat
ggttttggggaagaagcgttgccgcgaggtctggctggtcgccgcggccgtttcgtgctg
gaagttcgggggctcccgccgtctggaagttggcaagacctgaaggaccattttcggggc
attggcgatgtcggtttcgcagaggtcaggaaggatccggatgcgcctgattcagtcatg
gggaaggtgagcttcttctcgaaacgggacatgatggaggccatagaagtgctggatggc
agcactttcaggtctcatgagggggagaaatccagaatcagcgtgcgcgagaagcgagcg
cccggaggccgtggaggacgctccgatgacgctcacgacgcagcagcttatgacacagat
gctcgcggtggccgtaggaccaagtacggcagtctttatgaatccagcaatggaggatac
tccacaggtggcgcggacgcgtaccgcaatagcatcgaaatgatggacccctcgagcaga
ggtcgttccggcggcccaggtgccggaggctactacggacttcatcccactgggagcccg
tcgccacctcgcgggcacgccgcgtacaccgaaaacaaccgaaggggacggagcagaagc
ggggaacgaggtccaccaaccagaggtgcttatggagcctatggtccaccagctagctac
tacgatcggatcgggacgagtccgcgctgtcctaggctcagcatggaacgtggaagcagg
cgattcgacgactggacagacagaaggcgatgctga
DBGET
integrated database retrieval system
