Toxoplasma gondii: TGME49_224850
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Entry
TGME49_224850 CDS
T01093
Name
(RefSeq) polyadenylate binding protein, putative
KO
K13126
polyadenylate-binding protein
Organism
tgo
Toxoplasma gondii
Pathway
tgo03015
mRNA surveillance pathway
tgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TGME49_224850
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_224850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_224850
03041 Spliceosome [BR:
tgo03041
]
TGME49_224850
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TGME49_224850
mRNA cycle factors
Stress granule specific factors
TGME49_224850
Spliceosome [BR:
tgo03041
]
Complex C
Other components
Complex C specific factors
TGME49_224850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_occluded
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
7897639
NCBI-ProteinID:
XP_018635961
UniProt:
S8GEW7
LinkDB
All DBs
Position
X:2776323..2778629
Genome browser
AA seq
768 aa
AA seq
DB search
MATASPVVAPSSPASAPSQPSPMPASNAGADVPASGTGGHQAAADHTAGNANVSGGVSGT
TTAPAGQRPNGGMNAGAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVT
RRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDK
NIDNKALYDTFSLFGNILSCKVAVDDNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKT
VYVGPFIRRAERDNLAEAKYTNVYIKNMPSAWEDESRLRETFSKFGSITSLVVRKDPKGR
LFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKEEEGQKREGDQILFVGPH
QSKAHRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVM
RDERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMRLQQRFRLP
SLRPAAAALPGNVAAAAAAAQLQYGGGAPQLQGFAAGPGAMYAPRPLMGFSPHPHQVTAP
MLPWRQQQAAAAGAQFASQGVPMRPQLGPLQHLYGQTNAAAAAVAAGMHAAAAGGPPMQM
LQQQQRGGHRGGMGRQGGAGPVLNGNKQHMIGPKPGAGQQQPQGGPGSFKFTPQVRNQRL
DQQMQPPASVPAPHNHHQVMMEQSQQLLMNPDAPLTAAALAAAQPSMQKQMLGEKLFPLI
ARYQPELAGKITGMMLEMDNAELLILLESEAQLKAKVDEALRVLQQAS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcgtctcccgtcgttgcaccgtcctcgccggcttctgctccgtcccagccg
agcccgatgcccgcgtcgaacgcgggagccgacgttcctgcttcgggaactggaggccac
caagctgcggcagaccacacagctggaaacgcaaatgtcagtggtggtgtgtcgggaacg
actacggcgcctgctggtcagcgcccgaacggcggaatgaatgcgggcgcggcgaacttt
gtgtcgccttcgctgtacgtcggcgacctgcatcaggacgtgacggaggcgatgctgttc
gaagtcttcaactcggtgggtcctgtcacgagcattcgtgtctgccgcgacacggtcacc
cggcggagcttggggtacgcgtacgtgaactaccagggaatccaggacgcggagcgcagc
ttggacacgctgaactacactgtgatcaagggccaaccttgccgaatcatgtggtgccac
agagacccgtcgctgcggaagagcgggaacgggaacatctttgtgaagaacctggacaag
aacatcgacaacaaggcgctgtatgacactttcagtctgttcggcaacatcttgtcctgc
aaggtcgccgttgatgataacggtcacagcaagggctacggcttcgtccactacgagaac
gaggagagcgcgcggtcggcgattgacaaagtgaatgggatgctgatcggcggcaagact
gtgtatgtcggccctttcattcgccgggcggaacgcgacaacctcgcggaagccaagtac
acgaacgtgtacatcaagaacatgccttccgcctgggaagacgagtcccgcctcagagag
accttctccaagttcggctcgatcacttcccttgtggtcaggaaggacccgaagggccgt
cttttcgccttttgcaacttcgctgaccacgacagcgcgaaggccgctgtggaggcgttg
aacgggaaacgcgtgaccgacgcaggcgcgatcaaggagggagaagacagtggcgcggaa
gagaaggaggaagagggacagaagcgcgagggcgaccagatcttgttcgtcggacctcac
cagagcaaggcgcaccggtctgcgatgcttcgtgccaagttcgagcagatgaaccaggac
cgcaacgaccgatttcagggcgtgaacctgtacatcaagaacatggacgacagcatcgat
gacgagaaactgcgtcagctgttcgagccattcggctccatcacgagtgccaaagtgatg
cgcgacgagcgcggcgtttcccggtgcttcggcttcgtgtgcttcatgtctccggaagag
gccaccaaggcggtcactgagatgcacctcaagcttgtcaagggcaagccgctctacgtt
ggcctcgccgagcgtcgcgaacagcggctgatgcgcctgcaacagcgcttcaggctgccg
tccctccggcctgcagcggctgccctcccgggcaacgttgcagctgccgcagcagctgcc
cagctgcagtacggcggcggagcgcctcagctccaaggctttgccgccggtccgggtgcg
atgtatgcgccgcgtcccctcatgggcttctcgccgcatccgcaccaagtcactgcgccc
atgctgccctggagacagcagcaggctgcagcagctggcgcacagttcgcctctcagggc
gtcccgatgcggccgcaactgggccccctgcagcacctctacgggcagacaaacgctgcc
gcggcggctgtggccgcgggcatgcatgcagcggccgctggcggaccgcccatgcagatg
ctccagcagcaacagcgcggtggccaccgcggaggcatgggccgccagggcggcgcaggc
ccggttctgaacgggaacaagcaacacatgattggcccgaagcctggagctggacagcag
cagcctcagggcggacctggcagcttcaagttcactccgcaagtgaggaaccagagactg
gatcaacagatgcagccgccggcctctgttccggccccgcacaaccaccaccaagtgatg
atggagcagtctcagcagctcctcatgaaccccgatgcgccgctgacagccgccgccctt
gcggccgcgcagccttcgatgcagaagcagatgcttggagaaaagctctttcccctgatt
gcacgctaccagcctgaactggccgggaagatcacgggcatgatgctggagatggacaac
gccgagttgttgattctcctagagagtgaggcccaactaaaggccaaggtggacgaagct
ttgagggtgcttcagcaggcgagttga
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