KEGG   Toxoplasma gondii: TGME49_230960
Entry
TGME49_230960     CDS       T01093                                 
Name
(RefSeq) splicing factor 3b, subunit 3, putative
  KO
K12830  splicing factor 3B subunit 3
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_230960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgo03021]
    TGME49_230960
   03041 Spliceosome [BR:tgo03041]
    TGME49_230960
   03036 Chromosome and associated proteins [BR:tgo03036]
    TGME49_230960
Transcription machinery [BR:tgo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     TGME49_230960
Spliceosome [BR:tgo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TGME49_230960
 Complex B
    TGME49_230960
 Complex C
   U2 SnRNP specific factors
    TGME49_230960
Chromosome and associated proteins [BR:tgo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     TGME49_230960
    TFTC complex
     TGME49_230960
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A WD40_CDC20-Fz Beta-prop_BBS7
Other DBs
NCBI-GeneID: 7898400
NCBI-ProteinID: XP_002367997
UniProt: A0A125YIG4
LinkDB
Position
VIII:complement(join(1138067..1138204,1138366..1138467,1139059..1139298,1139903..1139981,1140325..1140464,1141031..1141156,1141577..1141642,1142275..1142403,1142727..1142831,1143037..1143221,1143667..1143811,1144234..1144346,1144848..1144983,1145833..1147232,1147722..1147988,1148835..1149165))
AA seq 1233 aa
MPVLYHLTLQKPTAIVHALQGNFSAPRAQEVVVSRGRVLELLRPDDQGKLQAISSTEVFG
IIRSIAAFRLTGANRDYLAIGSDSGRLAIVQFSAEKNEFERVHCETYGKTGIRRVVPGEY
LAVDPKGRTLMVAAVERQKFVYIVNRDNKAQLTISSPLEAHKSHAICHDLCGVDMGFDNP
LFASLEQNVESSDRKPATPGVTVPKGLCLWEMDLGLNHVIKKATLPVPASAHCLIPVPGG
GGADGPSGLLVCCGNFLLYKKPDHEEICCAIPRRLETGSDRGLAVVAFAVHRMKDFFFIL
IQTEYGDIYKVEISHEEGVVREVVCRYFDTVPVANALCVLKSGYLFVASEFGNHLFYQFT
GIGSDASDPRCSSTHPLGREAIIAFKPRPLRNLALVDELQSLSPITDLKVLDAQGTGAPQ
VYVLCGKGPRSTLRILQHGLGVEEMADNELPGRARAVWTTKLSHQNAFDGYIFVAFDGSS
LVLQIGDTVEEVTDSAFLTNVSSLLVALMYDDSFIQVHETGIRHILKSKRVNEWRAPGGR
RIKAAAANERQLVISLAGGELVLFEVDDAHTLVETARRNINVESTCMSMQAIPKGRLRAS
FLAVGGLDNMVRILSLEKDRNLRQLSTQLLPNDATPESVCLATLTGLGANSTDAGKSQDN
GVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPAILALSEKSW
LCYTFQHKLHCIPLNYDPLECVASFCSEQCTDGFVAIAGGSLRIFRCQRLGETFGQTVLP
LSFTPRAMAALPHPSAAESQAGGDAAGADPSRRASALAIVEADHNAYDESTKAEIRRALK
GIKVNQEEEEDKEETDDMQLEEKEQQDLPEDHYGTFKAGPGKWGSCIRIVNPLMAMTIDK
VSLETDEAALSCCFCEMEGLPLLVVGTVTAMTLKPKKVPHASIKVFSYDDKFSLSLVHST
PVEDYPMALTAFRGMLLAGVGHKLRLYALGRKRLLKKCEYKNLPCGVAFIRVAGDRLFVG
DVRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSVFICRVPSEAK
EDELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEIVTALERATLTSAASESIVYGTIM
GSIGSFSPFLTKHELDLFTHLEMVMRSEKPPLAGREHIMFRSYYHPAKNTVDGDLCESYA
LLPYEDQKRIAQDFEKTPADILKHLEDIRNRIL
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgcctgtcctttaccatttgaccctgcagaagccgacggcgattgtccacgctctgcag
gggaacttcagcgcgcctcgtgctcaggaggtagttgtttcgcgcggccgagtcttggag
ctgcttcggccggacgaccaggggaagctgcaggccatttcgagcacagaagtcttcggc
atcatccgctccattgccgctttccgtctgacgggagcgaaccgagattacctcgccatc
ggcagcgacagcggccgactggccatcgttcagttctccgcggaaaaaaatgaattcgag
cgcgtccactgcgaaacctacgggaaaacgggcattcggcgagttgttcccggggagtat
ctcgcggtggaccccaaagggcgcacgctgatggtggcggccgtcgagcgtcagaagttc
gtttacattgtcaaccgcgacaacaaggctcagctgacgatcagcagcccactggaggct
cacaagagtcacgcgatttgccatgacttgtgtggagttgacatggggttcgacaatccg
ctctttgcgtctctcgaacaaaacgttgaatcctcggacagaaaacctgcaactcccggc
gtcacagtcccgaaggggctttgcctgtgggaaatggacttgggtctgaaccatgtgatc
aaaaaggcgacgttgccggtgccggcgtccgctcactgtttgattccggtgcctggcggt
ggcggagcggatggaccgagcggcctgttggtgtgctgcgggaacttcttgctgtacaag
aaacctgatcacgaggagatctgctgcgcgattccgcggcgactggagacaggttccgac
cgcggcctcgccgtcgtcgcgttcgccgtgcaccgcatgaaggacttcttcttcatcctc
atccagaccgagtacggcgacatctacaaagtggagatctcgcacgaagaaggcgttgtc
cgggaagtcgtctgtcgatacttcgacacggtgccggtcgcgaacgctctctgcgtgctc
aagtccggatacttgtttgtcgcttccgagtttgggaatcacctcttctaccagttcacg
gggattgggtcggacgcctccgatccgcggtgctcgtcgacgcatccgctgggtcgcgag
gcgatcatcgccttcaagccccgcccgctgaggaacctggcgctcgtcgacgaactccag
tcgctctcgccaatcaccgatttgaaggtcttggatgcgcaaggcactggcgccccgcag
gtctacgtcctctgtgggaagggaccgcgcagcacactccgcattctccagcacggcctc
ggagtcgaggagatggcggacaacgagttgccgggacgcgcgcgcgccgtctggaccacc
aagctgtcacaccagaacgcgttcgatggctacatcttcgtcgcgttcgatggtagcagt
ctcgtgctccagatcggcgacactgtcgaggaagtcaccgacagcgcgttcctcacgaac
gtctcctcgctgctcgtcgccctcatgtacgacgactccttcattcaagtccacgaaaca
ggcatccggcacatcctcaagagcaaacgtgtgaatgagtggcgagcgccgggcggacgc
cgaatcaaagccgctgcggcaaacgagagacagctggtgatctcgctggcgggaggagaa
ctcgttttattcgaggtcgacgacgcacacaccctcgtcgaaaccgctcgaagaaacatc
aacgtcgagtccacatgcatgagcatgcaggcgatccccaaaggtcgcctccgcgcctcc
ttcctcgccgtcggcggactcgacaacatggtccgcatcctcagcctggagaaagaccgc
aacctgagacagctgtccacccagctcctccccaacgacgcgacgcccgagagcgtctgc
ctcgcgacgctcactggcctaggcgcgaactcgacagacgcaggcaaaagtcaagacaac
ggggtcttgtatctgcacgtcggcctaaatacgggtgtgatgattcgcagcgtcgtagac
cctgtcctcggcacccttctagaccagagaagcagattcttgggaggtcgcgccgttcgc
ttccacgccgtcacccttcagggccaaccagcaattctggcgctgagtgagaagtcgtgg
ctgtgctacaccttccagcacaagctccactgcatacctctcaactacgatcctctcgag
tgcgtcgcctctttctgctctgagcagtgcacggacggcttcgtcgcgattgcaggtgga
agcttgcgaatttttcgatgccagcgactgggcgagactttcgggcaaacggttcttccg
ctctcgttcacaccgcgagcgatggcggctctccctcacccttccgcggcagagtcgcaa
gcgggaggagacgccgccggggcagacccatcgcgccgcgcatcggctctcgccattgtg
gaggccgaccacaacgcgtacgacgagtcgacgaaggccgagattcgccgagccttgaag
ggcatcaaggtcaaccaggaagaagaagaagacaaggaagaaaccgacgacatgcagctg
gaagagaaagagcagcaagacctacctgaagaccactacggaaccttcaaggcaggccct
ggcaagtggggatcttgcattcgaatcgtcaaccccctcatggcaatgaccatcgacaag
gtgtctcttgagacagacgaggctgcactcagctgctgcttctgcgaaatggagggtctg
cctctcctcgtcgtcggcaccgtcacggcgatgactctcaagccaaaaaaggtgcctcac
gcgtccatcaaagtcttctcatacgacgacaagttctccctcagtttggtccactccact
cctgtagaagactatccgatggcgctgactgcgttccgaggcatgctgctcgcgggcgtc
gggcacaaactgcgtctctacgcgttggggaggaagcgcctgctgaagaagtgcgagtac
aagaatctgccctgtggcgtagctttcattcgcgttgccggggacagactcttcgtcggc
gacgtccgagagagtgttcacgttatgcggtaccgcctcagcgaaaacctcttctacgtt
cttgcagacgatgtcgttccacgatggctgaccaagggcgaagtgctcgactaccacacc
ttcgtggcggcggacaaattcgactccgttttcatttgccgagtcccgagcgaggcgaag
gaggacgagctaggcgatacgacgggtctgcgtctgcggggcgataccacttacctgacg
gacaaatgcttcaaattgcagtctcttctgcacttccatatcggcgaaatcgtcactgcc
ttggagcgcgcgacactcacttctgctgcttctgaaagcatcgtctatggcacgatcatg
ggctccatcgggtcattctctcccttcctcacgaaacacgaactggatctcttcacacat
ctggagatggtcatgcggtctgagaaacctcctctcgcgggccgcgagcacatcatgttc
cgttcctactaccaccccgcaaagaacaccgtggacggcgacttatgtgaaagttacgcg
ctgctgccgtacgaggatcagaagcggattgcccaggatttcgagaagacccccgcggat
attctgaagcatcttgaagacatcagaaacagaattctatag

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