Toxoplasma gondii: TGME49_233020
Help
Entry
TGME49_233020 CDS
T01093
Name
(RefSeq) Not1 N-terminal domain, CCR4-Not complex component protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tgo
Toxoplasma gondii
Pathway
tgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_233020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_233020
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TGME49_233020
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TGME49_233020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
7899320
NCBI-ProteinID:
XP_002368161
UniProt:
A0A125YXV6
LinkDB
All DBs
Position
VIII:complement(join(2346984..2347054,2347618..2347774,2348247..2348545,2348935..2349987,2350556..2351312))
Genome browser
AA seq
778 aa
AA seq
DB search
MAEKRKLQQEVEKTLKRVEEGLDAFNDVCEKMHGPVVSASQKEKFENELKREIKKLQRLR
DQIKTWQTSSDIKDKAPLDEARKKIEREMERFKVCERESKMKAFSKEGLAAKTKLDPQEE
ERNRHREWLNEFISTLNTHVDAHEAEEELLMSSKKGKHRDHANTERRLGQLQLYVQRHRW
HINNMELILRRLENDSLDLSVMDELKESIELYLDNFNDDDFFFDETLYAALNLDAPDDNS
EMVKDSEEENTSSDQCGDSTPPSGRGSQEASGAAGSPTSTASVPSFNSDRTERLPGTVAP
GEKSRNSGALSAPAKAPSSRGSAGAAPGASGASKGEKGLSGDAGKARPGGEKGADGGAAS
GALSPNGSSGGSSPGLLVAKKGAERGSPGEAASPAAPSADASRATNEGETLSPHASGKAQ
MSPRTGENGVWTGARRPGASLLPAVSAASSAPASGRWAAVAGGLAGADGQSVRKRGASEE
KKDDGEEARRRSVPGREPEEEKGAAAKDKRRGGAAPGPQGKAQGDGAAERNSGEADQKAE
SGDRERLEMEDEEAQGKGHSVRPPAPGGDAAEGDTTDRGVPSARATASAKAGDGFLFPGT
SSSLSTVAALVDCSQSHRPTRSDAEQIPGGSICGRSSAALGWGPNMFGPGGPGARPLAPL
SPQIAWTCAPESFPDAPLVGYDSRQLFAGLDLDTLFFVFYYQQGTYQQYLAARELKQQSW
RYHKKYLTWFQRHEEPRITADKYEQGTYVYFDYDSGWCSRIKQEFTFEYHWLEDELAV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagcgaaagctgcagcaggaggtggagaagacgctgaagcgcgtcgaggag
ggtttagacgccttcaacgacgtctgtgaaaagatgcatgggccggtggtcagtgcctcg
cagaaagagaagttcgagaacgaattaaagagggaaataaagaagttgcagcggctgcgg
gaccaaataaagacctggcagacgtcgtcggacatcaaggacaaggcgcccctggacgag
gcccggaagaagattgaacgcgaaatggaacgcttcaaagtctgcgaaagggagtccaag
atgaaggcgttctccaaggaaggcctcgcggcgaagacgaagctcgacccgcaagaagaa
gaaagaaatcgacacagagagtggctgaacgaattcatttccaccctcaacacccacgtg
gacgctcacgaagccgaagaagaactcctcatgagcagcaaaaaagggaaacacagagac
cacgccaacacggagcgacgccttggccagcttcagctgtacgtacagcgccaccgatgg
cacatcaacaacatggaactgattttgcggagactcgaaaacgactctctcgacctgtcg
gtgatggacgaactgaaggaaagcatcgaactgtacctcgacaatttcaacgatgacgac
ttcttcttcgacgaaacgctctacgctgccctgaaccttgacgctcccgatgacaactcc
gagatggtcaaggattcagaagaggaaaacaccagctcggaccaatgtggcgactcgacg
cctccgagtgggcgcggaagtcaagaggcttccggggcggccggaagcccgacgagcacg
gcgagcgttccgtccttcaactcggatcgcaccgagcggcttcctggaaccgtcgcgcct
ggcgagaagagccggaacagcggcgcgctgagcgcacctgcgaaggcgccttcgagtcga
ggctctgcgggggctgctccgggggcctcaggagcctcgaaaggcgagaaaggcctttcc
ggcgacgcggggaaggcacggcctgggggcgagaagggcgccgatggtggcgccgcctca
ggcgcgctgtccccgaacggttccagcggcggcagttctccggggctcctcgttgcgaag
aagggtgccgagagaggctcgccgggagaggcggcgagtcccgcagcgccttctgcggac
gcgtcacgcgcgaccaacgaaggcgagacgctgtctccacacgcgtctgggaaggcgcag
atgtctcctcggacgggagaaaacggcgtctggacgggcgccagacgccccggcgcgagc
ctgctgccggcggtcagtgcggcttcctcggcacccgccagcggccggtgggcggcagtc
gctgggggccttgcaggcgcggatgggcagagtgtccggaagcgcggggcctctgaggag
aagaaggacgacggcgaggaggcgcggagacgcagtgtgccgggacgcgagcctgaggaa
gagaagggcgcagcagccaaggacaaacgccgcggcggagcggccccaggccctcagggg
aaggcccagggagacggcgccgccgagaggaattccggtgaagcggatcagaaggccgag
agcggcgaccgagagcgcctcgagatggaagacgaagaggcgcagggaaaagggcacagt
gtgcgccctcccgccccgggcggagacgccgcggaaggagacaccacagacagaggagtg
ccaagcgcgcgcgcgacggcctccgcgaaggctggcgatgggttccttttccctgggacc
tccagttcgctctccacggttgcagctctcgtcgactgcagccagtcgcaccggccgacg
cgatcggatgcggagcagatccctgggggcagcatttgtgggcgctcgtcggcggctctg
ggttggggtccgaacatgttcggacctggaggccctggggcgcggccactcgctccactc
tcgcctcagatcgcctggacttgcgcgccagagagcttccccgacgcgcctctcgtcggt
tacgacagtcggcaactttttgcaggccttgatttggacactctcttcttcgtcttctac
taccagcaggggacctatcagcagtatttggctgcccgggagttgaagcagcagtcatgg
cgctaccacaagaagtacttgacttggttccagagacatgaagagccgcggatcactgca
gacaagtatgagcagggcacttacgtctacttcgactacgactctggctggtgctcgagg
atcaaacaagaattcacgttcgaatatcactggcttgaagacgaactcgcggtgtag
DBGET
integrated database retrieval system
