KEGG   Toxoplasma gondii: TGME49_235020
Entry
TGME49_235020     CDS       T01093                                 
Name
(RefSeq) COPI protein, putative
  KO
K17302  coatomer subunit beta'
Organism
tgo  Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgo04131]
    TGME49_235020
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tgo04147]
    TGME49_235020
Membrane trafficking [BR:tgo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    TGME49_235020
Exosome [BR:tgo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   TGME49_235020
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR54
Other DBs
NCBI-GeneID: 7899412
NCBI-ProteinID: XP_018635841
UniProt: S8GEA9
LinkDB
Position
X:complement(join(4606309..4606356,4607165..4607940,4608289..4608345,4608663..4608774,4609308..4609427,4610211..4610297,4611307..4611462,4612055..4612210,4612551..4612679,4612943..4613024,4613241..4613341,4614111..4614350,4615054..4615246,4616123..4616349,4617071..4617159,4617955..4618111,4618401..4618639,4619324..4619408,4620001..4620082,4620808..4621073,4621553..4621739,4622521..4622702))
AA seq 1256 aa
MPLRVSLKKHFFARSERVKSVDFHPTEPFLLSALYDGRLQIHDYTTHALVKEIDASPLPL
RTAKFIVKRQWMICGGDDCALRVFNIHTLEKVKEIPSAHGDYIRHISVHAAKPLVLSSSD
DMTVKLWHYEKNWQKVASYEQHTHYVMQTQWHPRDPNLFASCSLDRTIKVWGIQVRSSSP
SASDSSAAVVSAPHFTLTGHERGVNCIEYSKSGERPYLVSGSDDCTVRVWDYQTKQCIQV
LSGHSRNVCSVLLTSLAGHVLPLLFSAGEDAQLFVWHALTYKKELSLDLNVERIWSLSLL
DPSSAASASTSGSAGVASAAGATGSGAGGLGGLVLAIGSDSGTLVLKMGKEQPVASLHSG
KAVVARGFEILQVNLRLLEEQQYQDGERLPVAYKELGQCEIFPQTISHHPNGRFIAVCGD
GEYVIYTAQALRNKTFGKCVDFVWSADGHYAIREESNRIRVHTSFTETFNFTPPFSVETL
WGGALLALKASDDSFVCFYDWEACRLIRRIDVVGVQQVHWSPSGFFVALFTSDKVYILRH
DKFAVMAANAAQAREEEGGIEIAFELVDQVTESAGSGVWVSECLVYTTAQGRVKCWCAGQ
VETLHHLNAGGRASSFILGYLPEHNRLYLIDRDLGLSACSLHVAFIEYKVAMARGDLQAA
EEFLPRIPVELHDRTARFLFSKGYKEEALRLARDEQLRFDVALSLGRLQTCAELVRSTSK
SSTEPGTVVARWKRLGDMALETGHLPLAASCFHECRDHHSLLLLYSASGDAPRLLNVAAE
ALKDKNFTVAFLAYALCQRVDNCVDVLWAAERFPEAALFARSYAPSRASACVQKWRDALW
KKQSKGDKRQKSDSQRKEEELCCRAGGPADPAEHPEKFENLQDAIEAEKILRERYARVVP
ASTFPSVRSLLDYDIVQQINQEGVQKIRNELLSISLDEVLEGAGETKEVPDLLDAGAPGS
LPHGQELPVNGTAREACVSGFDETLSGVPADMHRLPHSHAASSPVAPEAAASSSQAPLYR
SAVAEGALGTLEPHVNHAPNSTLDAAVSGSASVAYSDIRSTVTERSAYTGTSSLDGQTGA
GASGVYTLGASWGDGSVAQSQVGVDSREEERERFGDTEKRVEFVEDEVDAVGVYSGSRTQ
ADGQSDGQSPHASWRLHPPSVSPGVRDPGSACSGYGVERIAAHPENDFARTSQFASPHSH
GGGMHQEQRQPGQEFYGAADAGAQFLRDEFVDVAEPSELRKGVAGGSDSSFSDVEA
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgcctctccgggtctcgctgaaaaagcactttttcgcgcgctctgagcgcgtcaagtct
gtggacttccaccccacagagcctttccttctctctgccctctacgatggtcgacttcaa
atccacgactacaccacgcatgcactcgtcaaagaaatcgacgcctctcccctccctctc
agaacggcgaagtttatcgtcaagcgacaatggatgatctgtggaggagacgactgcgct
ctgcgcgttttcaacatccataccctggagaaagtgaaggagattccaagtgctcatgga
gactacattcggcacatctccgtgcatgcagcgaagcctcttgttctctcttcctcggat
gacatgactgtcaagttgtggcactacgagaagaactggcagaaggtcgcctcttacgag
cagcacacccactacgttatgcagacccagtggcaccctcgagacccaaatctttttgct
tcttgttccctggatagaaccatcaaagtgtggggaatccaggtccgcagttcttcacct
tccgcctccgacagcagcgcggcggttgtctcagccccccatttcaccctgacgggtcac
gaacgaggcgtcaattgcatcgaatactccaagagcggagaacgaccctacctggtctca
ggcagtgacgactgcaccgttcgcgtctgggattatcagaccaagcagtgtatccaggtt
ttgagtggccactcgcggaacgtgtgctcagttctgttaacgtcgcttgcagggcacgta
cttcccctcctcttctccgcaggcgaagacgcgcagctgtttgtgtggcatgcgctgacg
tacaagaaggagctttctctggatttaaatgtagagcgaatctggtccctgtctctcctt
gatccttcctcggctgcctctgcctcgaccagtggctctgcaggcgtcgcctctgccgct
ggcgcgacaggctcaggcgcaggcggcctggggggtctcgtcctcgccattggaagtgac
tcgggaactctcgttctcaaaatggggaaggagcagccagttgcgtcgctgcacagtggc
aaggcagttgttgcgcgaggctttgaaattctgcaagtgaatttgcggctgttggaggag
cagcagtatcaggacggcgaacggttgccggtggcgtacaaggaactcggccaatgcgaa
atttttcctcaaaccatcagccaccaccccaacggtcgattcattgcggtctgcggcgac
ggcgaatacgtgatttacacagcacaggctttgcgaaacaagacgttcgggaagtgcgtt
gactttgtgtggtcggctgacggtcactatgcgattcgagaggaaagcaatcgcatccgc
gttcacacaagcttcacagaaaccttcaactttactccccccttctcagtagagacgctg
tggggtggagcccttctcgctctcaaggccagcgacgactctttcgtctgcttctacgat
tgggaagcttgcaggctcattcgccgcatcgacgtggttggcgtgcagcaggtgcactgg
agtccgagcggcttcttcgtcgctcttttcacttccgacaaagtctacattctgcgtcac
gacaaatttgcagtcatggcggccaacgcagcgcaggccagagaggaagagggcggcatc
gaaatcgccttcgaactcgtagaccaagtgacggagtcagcgggcagtggtgtctgggtt
agcgagtgcctggtctacacgacggcgcaagggcgcgtaaaatgctggtgcgcaggtcag
gtcgaaacgctccatcacctgaatgcggggggccgagcttcctcgtttatcctcgggtac
ctgccagaacacaatcgcctgtacttgattgaccgcgacctaggtctcagcgcatgcagt
ctccacgtcgccttcatcgagtacaaggtcgcgatggcgcgcggcgacctgcaagcagcc
gaggagtttcttccgcgtatccccgtcgaactacacgaccgcactgcgcgtttccttttc
tcaaaaggatacaaagaagaggctctaagactcgcgcgagatgagcagctgcgcttcgac
gtcgccctgtctctgggtcgcctgcaaacttgcgccgagctggtgcggtcgacgagcaaa
tcttcgacagagccggggacggtcgtggctcggtggaagcgtctgggcgacatggccctt
gagacggggcatttgcccttggcagcctcttgcttccacgagtgccgggatcaccactcg
ctgctcctgctctactccgccagcggagacgccccaaggctgctgaacgtcgcagctgag
gctctcaaagataaaaactttactgtggcgtttctcgcctatgcgctctgtcagcgcgtc
gacaactgtgtcgatgtgctctgggcggccgagcgattcccagaggcggctctgtttgcc
cggagctacgcgcccagtcgtgcgagtgcatgcgtgcagaagtggcgagatgccctttgg
aagaagcagagcaaaggagacaaaagacagaaaagcgactctcagagaaaagaagaagaa
ctttgctgcagagcaggcggcccagctgaccctgcggagcacccagagaaatttgagaat
cttcaggatgccatcgaggcagaaaagattcttagagagagatacgctcgcgtcgtccct
gcttcgacttttccgtcggtgcggagcttgctcgactacgatatcgttcaacagatcaac
caagaaggtgtacagaaaatccgaaatgaattgctttcgatttctctggacgaagttctg
gagggagcaggcgaaacaaaggaagtgccagacctcctcgacgctggggcgcccgggtcc
ctgccccacggacaggagctccctgtgaacggaactgcgcgcgaggcatgtgtgtctggt
ttcgatgagactttgtcaggcgtgccggccgacatgcatcgcctgccccacagtcacgca
gcttcttcacctgtggcgcctgaggctgcggcctccagctcgcaggctcctctgtatcga
tcagcggtggctgaaggcgcgctggggacgctcgaacctcatgtaaaccacgcgccgaac
tcgactctcgatgctgctgtctctggatctgcgagcgtcgcctattccgacatccgcagc
accgtgacggaaagaagtgcctacactggcacctccagtctggacggacagactggcgcc
ggtgcctccggcgtctatacacttggcgcgagttggggagacgggagtgtcgcgcagtcg
caggtcggcgtggacagccgggaggaagagcgagaaaggttcggagacactgagaagcgt
gtagagttcgtggaggacgaagtcgacgccgtgggcgtgtactcggggagcagaactcag
gcagatggccagagcgatgggcagtccccgcatgcgtcgtggaggcttcacccgccatct
gtgtccccaggagttcgagacccagggagcgcatgcagcggctatggggtcgagcgaatc
gcagcgcatcctgagaacgactttgcacgcacaagccagttcgcgtccccgcactcacac
ggcggaggaatgcaccaggaacagcgacagcccggccaggagttctacggagcagccgac
gcgggcgctcagtttttgcgagacgaatttgtcgatgttgcggagcccagtgaactgcgc
aaaggtgtggcaggcgggagcgacagttccttttccgacgttgaggcgtga

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