KEGG   Toxoplasma gondii: TGME49_236080
Entry
TGME49_236080     CDS       T01093                                 
Name
(RefSeq) replication factor-a protein 1 (rpa1) subfamily protein
  KO
K07466  replication factor A1
Organism
tgo  Toxoplasma gondii
Pathway
tgo03030  DNA replication
tgo03420  Nucleotide excision repair
tgo03430  Mismatch repair
tgo03440  Homologous recombination
tgo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TGME49_236080
   03420 Nucleotide excision repair
    TGME49_236080
   03430 Mismatch repair
    TGME49_236080
   03440 Homologous recombination
    TGME49_236080
   03460 Fanconi anemia pathway
    TGME49_236080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tgo03000]
    TGME49_236080
   03032 DNA replication proteins [BR:tgo03032]
    TGME49_236080
   03400 DNA repair and recombination proteins [BR:tgo03400]
    TGME49_236080
Transcription factors [BR:tgo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    TGME49_236080
DNA replication proteins [BR:tgo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    TGME49_236080
DNA repair and recombination proteins [BR:tgo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     TGME49_236080
   MMR (mismatch excision repair)
     TGME49_236080
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     TGME49_236080
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon CDC24_OB3 DUF223 tRNA_anti_2
Other DBs
NCBI-GeneID: 7900122
NCBI-ProteinID: XP_018635804
UniProt: S8G4V7
LinkDB
Position
X:complement(join(5267476..5267646,5268068..5268347,5268815..5268887,5269371..5269494,5269943..5270055,5270370..5270511,5270935..5271043,5271457..5271596,5272026..5272094,5272640..5272712,5273062..5273200,5273555..5274149,5274805..5274898,5275520..5275690,5276084..5276493))
AA seq 900 aa
MPPLPPYHGTAECSEVNSSFSSRENAPPHSARPPAYNDHSSYQLFHGPSSYSRPPSSAHP
SAGSSEHRPETSSEQPPPDFPPEISFAFLVKFADAAFALQQQKGGACPSAQELLQLADPL
EPCLLCLAALHAKKKTIITVSDGVSWCRIASTQLPPLPPGSSDPPTEEDLNAAALALSGC
IVRLGNISITRTPRGKHIILARAFQVISQNCQALAERLQTQRRPEVVFPSLPEGGHTAPP
SSSPPSYPPPSYPSSAPHPSSHPPPSYPSSSAPHPSSHPPPSYPSSSAPHPSSHPPPSYP
SSSAPHPSSHPPPSYPSSSAPHPSSHHASSSYPPSSHPPRAFSRDESVRNAPFRQATGEP
EAAAAVRGELRQFPGQEPRCTDTRQAPAVPPAGHQLYGQQSRGADDLQAPAGPQRHQSSG
SHRSTPYPATGQPQQGQHGLRPMGAESFIPLKDLTAYVAKWTIRARVDVKGDIRKYNGAR
GPGQLFNVELKDKDGEIRATFFNAAVDKWYNILQEGKVYYFRGGSVKPKNPRFNHTRHDY
ELTFDEKSSIVEAESGADIPSISRADLVDIRGIEEKEVNSTVSLIAIVHDYRPIQSITIK
STGQQKPKRDVFLVDEGGRSLVLTLWGEKTETLPEEQLCQKPLVLLKSVKVGDWNGRKLD
SQGNTRVELFPDGNRAAEVQDWWNQEGSRRGSFASLSGGGLAVGRKEILKSLEQVAQEAA
QAEAAVLSDKGVYATSCALLERIGDDRFSWPACPDCRKKMNEEMPRCWQCPSCRKQCEQP
NHTYMLNLSLMDLTGSLRCSCIGEKAEEFMANTKAETVLLLAEHRALDEQGRSFQDIFAD
ANLEEWIFRICSKYDSWMDEVSIKQRVVAAAPLFRRVGEQTQHRLDFVRTAFHHLNIPLP
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgccgcctctccccccctaccacggcactgcggaatgcagcgaagtcaactcttcgttc
tcatctcgagaaaacgctcctccccacagcgcgcgtcctccagcctacaatgatcactcg
tcctaccaactcttccacgggccgtcttcgtacagtcgacctccttcttccgctcatccg
tctgccggttcttcggagcaccgtccagagacttcttcggagcagcctccccccgacttc
cctccggagatttccttcgcgttcctcgtaaaattcgccgacgcagcgttcgcgctgcag
cagcagaaaggcggcgcctgcccgtctgctcaagagctcctgcaactcgctgaccctcta
gaaccttgtctcctctgcctcgctgctctccatgcaaaaaagaaaaccatcataactgtg
tctgatggagtcagttggtgtcgaattgcgtccactcaactgccgcctctcccgccaggt
tcctcagacccgccgacggaagaagatttaaatgcggcggctcttgccctctccggctgc
atcgttcgccttggaaatattagcatcacgcgaactccacgaggaaagcacatcatcctt
gcccgagctttccaagtaatctctcaaaattgccaagccctggccgagcggctgcagacc
caaaggcgcccagaggtagtctttccttccctcccagaaggcggacacacagcaccgccg
tcctcttctcctccttcttatcctcctccttcttatccttcttctgctcctcacccttca
tctcatccgcctccgtcttatccttcttcttctgctcctcacccttcatctcatccgcct
ccttcgtatccttcttcttctgctcctcacccttcatctcatccgcctccttcgtatcct
tcttcttctgctcctcacccttcatctcatccgcctccgtcttatccttcttcttctgct
cctcacccttcttctcatcatgcgtcttcttcgtatcctccttcttctcatcctcctcgc
gctttctctcgagatgaatctgttcgcaatgcaccatttcgacaagcaacaggcgagccg
gaagcagcggccgcagtaagaggggaactgcggcagtttcccggccaagagccgaggtgt
acagacacccgacaggcgcccgcagtgcctccggccgggcaccagctgtacggacagcag
agcagaggcgccgacgatctgcaagctccagcgggaccgcagagacaccaaagcagtggc
agccacagaagtacaccctatccagcaacaggacagccacagcagggacagcacggactg
cgtccgatgggggcagaaagtttcattcctctcaaagatttgacggcgtatgtcgctaaa
tggacaatcagagctcgcgtcgatgtcaaaggagacattcgaaagtataacggcgctcgg
ggacccggtcagctcttcaatgttgagttgaaagacaaagacggagaaattcgagcgacg
ttcttcaacgctgcagtcgacaagtggtacaatattctccaagagggaaaggtttactat
ttccgcggaggatccgtgaagcccaagaaccctcgcttcaatcacacgcgtcacgactac
gaactaactttcgatgaaaaatcttcaattgtagaggcagaatcaggcgccgatattccc
tccatttccagagcggatctggtggacatccgcggaattgaagagaaggaagtgaattcg
acagtcagcctgattgcgattgttcacgattataggcctattcagtccatcaccatcaaa
tcaacggggcagcagaagccgaagcgtgacgtttttctcgtcgacgagggaggtcggtct
ctggtccttactctctggggagagaaaacggagactcttccagaggagcaactttgtcag
aagccgcttgttctcctcaaatcggtgaaagtcggcgactggaatgggaggaaactcgat
tcgcagggaaacacacgcgtcgaactcttccccgacggcaacagagccgcggaggttcaa
gactggtggaaccaagagggaagtcgacgcgggagcttcgcgtccctttctggcgggggg
ttggccgttgggcgcaaagaaatcctaaaatcgctcgaacaagttgcacaggaggcggca
caggctgaagctgctgttctgtcggacaaaggcgtctacgcgacttcctgtgccctcctg
gaacgcatcggggacgaccgattttcatggccagcctgtccggattgcagaaagaagatg
aacgaggagatgccacggtgctggcagtgcccgagttgtcgaaagcagtgcgagcaaccg
aatcacacgtacatgttgaatttgtctttgatggatttgacggggtctcttcgctgcagc
tgcatcggagaaaaagctgaagaattcatggccaacacaaaagctgaaactgtgcttctt
ctcgcagaacacagagctcttgacgaacagggacgctccttccaagacattttcgctgac
gcgaatctcgaggagtggatcttccggatttgctcgaagtacgactcgtggatggatgaa
gtatcgatcaaacagagagtggtggctgcagcgcctctgtttcgcagagtcggcgaacaa
acgcagcaccgtctcgacttcgttcgaactgctttccaccatttaaacattcctttacct
tga

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