KEGG   Toxoplasma gondii: TGME49_236910
Entry
TGME49_236910     CDS       T01093                                 
Name
(RefSeq) U2 snRNP auxiliary factor, putative
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_236910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgo03041]
    TGME49_236910
Spliceosome [BR:tgo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    TGME49_236910
 Complex B
    TGME49_236910
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 7899109
NCBI-ProteinID: XP_002369044
UniProt: A0A125YHP5
LinkDB
Position
X:complement(join(5568747..5568846,5568950..5569205,5569327..5569536,5569815..5570013))
AA seq 254 aa
MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTSSPTIVLRHMYPNPPVAVA
IAEGQNVSDELLDQAADHFEAFFSEVFEELAKYGEVEDMVVCDNIGDHIIGNVYVKYTDE
EAANKALAALQGRFYSGKQIHAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRS
LKRKLFKKMFDDHPDYGRQRSPGRRRSRSRQRSSSPRRPTRRRSPSIQRPERRTSEERRA
MIAKWNEEREEANG
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcggagcatctggctcgtatcatagggacggaggaggatagagtgaactgtcctttt
tattggaaaattggagcctgtcgtcatggagatcagtgttctcggtcgcactataaaccg
acatcgtcgccaacaatcgtcctccgtcacatgtaccccaaccctcccgtagctgtggca
attgcagaaggacagaatgtttcggatgaactacttgaccaagcagcggaccacttcgag
gcatttttttctgaagtattcgaggagttagcgaagtacggtgaggtggaggatatggtg
gtgtgcgacaatataggcgaccacatcatcggaaacgtctacgtaaaatacacagatgaa
gaagcggcaaacaaggcactggctgccttgcaaggaagattttactcaggcaagcagatt
cacgccgagttcacccctgttacagatttccgggaagcacggtgccggcagttcgttgat
ggacagtgtcgcagaggcggatattgtaattttatgcatctcaagcatgttcctcgctcg
ctgaagaggaaactgtttaagaagatgttcgacgatcacccagattacggaaggcagcga
tctccggggcgaaggagatcccggtcgcgtcagcgatcctcctctccaagaagaccaaca
aggagacgttccccaagcatacagcggcccgaacgtcggacaagcgaagagcggagagca
atgatcgcgaagtggaatgaggagcgcgaagaagcgaatggatga

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