Toxoplasma gondii: TGME49_237110
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Entry
TGME49_237110 CDS
T01093
Name
(RefSeq) replication factor C subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
tgo
Toxoplasma gondii
Pathway
tgo03030
DNA replication
tgo03410
Base excision repair
tgo03420
Nucleotide excision repair
tgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TGME49_237110
03410 Base excision repair
TGME49_237110
03420 Nucleotide excision repair
TGME49_237110
03430 Mismatch repair
TGME49_237110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgo03032
]
TGME49_237110
03036 Chromosome and associated proteins [BR:
tgo03036
]
TGME49_237110
03400 DNA repair and recombination proteins [BR:
tgo03400
]
TGME49_237110
DNA replication proteins [BR:
tgo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TGME49_237110
DNA Replication Termination Factors
ELG1-RFC complex
TGME49_237110
Chromosome and associated proteins [BR:
tgo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TGME49_237110
DNA repair and recombination proteins [BR:
tgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TGME49_237110
Check point factors
HRAD17(Rad24)-RFC complex
TGME49_237110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_30
SLFN-g3_helicase
AAA_22
RCF1-5-like_lid
DEAD
AAA_16
AAA_19
KTI12
AAA_assoc_2
Rad17
AAA_11
ResIII
AAA_5
RuvB_N
AAA_14
ATPase_2
AAA_2
AAA_18
MeaB
AAA_28
AAA_24
Mg_chelatase
RNA_helicase
nSTAND3
DnaB_C
AAA_25
AAA_7
TIP49
NPHP3_N
DUF815
Motif
Other DBs
NCBI-GeneID:
7899147
NCBI-ProteinID:
XP_002369063
UniProt:
A0A125YUA5
LinkDB
All DBs
Position
X:join(5723099..5723208,5723808..5723886,5724668..5724747,5725223..5725275,5725587..5725668,5725869..5726006,5726473..5726521,5727143..5727277,5727729..5727788,5728591..5728650,5729408..5729470,5730011..5730107,5730496..5730563)
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AA seq
357 aa
AA seq
DB search
MTAAVSASSVEKAPSPFSTAAPPRVSSAQVVPWVEKYRPRRVEDMAHQVEPKKMLRRILE
TGNMPHLLFYGPPGTGKTSAALALVRELFGREEAKNRLLELNASDDRGIKVVRERIKQYT
KTNIAKGKINPETGREMPTWKIVILDEADMMTQDAQSALRRIMEAFSRTTRFIIICNYVH
RIIDPIFSRCSPHRFEPVARDAQEARIRHICDSEGLVVTSGAVDALLRISQGDLRRAVTL
LQSAASIYDDNLHEDAILEVAGQPPARIVTDFLRACQASPSQASSEVDNVISQGWDVCLL
LQEMIRQVVVSPHLKDLQKARVINDIAQKEFAVFQGASPYLQLLSLSLRIHDCLAAP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcagtctctgcttcttccgtggagaaggcgccttcgcctttctcgacagca
gcccctccccgagtctcctcagcccaggtggttccctgggtcgagaaataccgcccgcgg
cgcgtcgaagacatggcccaccaggtggagcctaagaaaatgctcagacgcattctcgag
accgggaacatgcctcatctgcttttctacggccctccgggaactggcaagacgtcggct
gctttggctctcgttcgcgaattgtttggccgcgaggaagcgaagaacaggctgttggaa
ctaaatgcgtcagacgacagaggcatcaaggtcgtgagggagagaatcaaacagtacaca
aagacgaacattgcaaaggggaaaatcaaccccgaaaccggcagagaaatgcccacctgg
aagattgtcattctcgacgaagcagatatgatgacccaagacgcccagtctgcattacgg
cgaatcatggaggcgttttcgcgcactacgcgtttcatcatcatctgcaactacgtccac
agaatcatcgacccgatcttctcccgttgctcgcctcatcgcttcgagcctgttgcccga
gacgcgcaagaggctcgcattcgacatatctgcgacagcgaaggcctcgtcgtcacttcg
ggggcagtggacgcgcttctgcgcatttctcagggagatctgcgacgcgccgtcactctt
ctccagtctgccgccagcatctacgacgacaatttacacgaagacgcaatccttgaagtc
gcaggacaaccaccagctcggattgtcacagatttccttcgagcctgtcaagcctctccg
agtcaggccagctccgaggtggacaacgtcatcagccaaggatgggatgtctgtcttctt
ctgcaagagatgatccgacaggtcgttgtttctccccacctgaaagacttgcagaaggcg
cgtgtgatcaacgacatcgcacagaaggagttcgcagtatttcagggggcaagtccgtac
ctccagctgctctctctttcgctgagaattcacgattgcctcgctgcgccgtag
DBGET
integrated database retrieval system
