Toxoplasma gondii: TGME49_238880
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Entry
TGME49_238880 CDS
T01093
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgo03021
]
TGME49_238880
Transcription machinery [BR:
tgo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
TGME49_238880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF3223
Motif
Other DBs
NCBI-GeneID:
7899632
NCBI-ProteinID:
XP_002366540
UniProt:
S8F4W9
LinkDB
All DBs
Position
VI:join(282228..284065,284458..284603,285192..285278,285637..286037,286602..286739,287398..287508,288101..288958,289369..289561,289955..291123,291502..291582,291963..292664,293183..296911)
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AA seq
3150 aa
AA seq
DB search
MEGAPRQSLGTLLQDRGGRRSRRSSDNETVLDSSFSLFPPSPVTGPADSAQGRMCPSLPA
SPQLSSSQSRLSALLFSLPSSLPSAPRPASLESLADRSSVPLQKKQGVEEGERGAGSLAS
ACEGQDEQRRGSLEAARSHMSVSSIPEQGADSPNVDFHEEDAKVSRASAASRERRTTVKD
SPKDDDTALSFPDPPSSPGARFTVSRASSPSLASRRSRSPDTQLPFARRTLSCSSTSASR
SRASVGDARLFSSSACSRSSPPLSPPGETSGTPLLRPTADPPSSAFPSSTPFSSSYPLGP
AVGLRRTRAISVHPSFPGASPPVSALERPRGASSLLPFSPPNTASDVLSPPPDLVLSPAC
GPSPRLKGAERPPAFSLLSPPMAAERRSGRRGSVPFSPPSACTDVLSPPPDLLSPYSPLP
PLLKESEKPPGGRLGGQGDRSGSSRGVSDAPQLFTSGPTRQEKPAASSFFFPPPPSPFGG
NASVLRLGAWLAERPGLDDDRFTPLLESFLLHFDFLAAGKVSRRIQQDQQIQRDLRLGED
EEGEVSFFRPVGRHTDEKSEQTRTGKREEDRERKGQTDQLEEFETTLLDILSLRGGNGVD
TSVDILVGQLREKPHRHKAAGEEGGGEPAGGTTGGIRIGEKFFFADKVALKSRLRQILQA
CDDEEELRGDDFELVKGVLEFHPKAKRKMQNLSGLFVSTHPNPKFRATRCFFIRRTIHAS
PSSSSSSSSSSSSASPPPGTVTPEGVATADENAGERAAAALAGSDQKPGEKREEQEEREE
GQTKAEEQTDVQEECEDFSYVRCVDNMLEDDSQADRLICHILKQLAEAFPGCVAHLHEAL
RRNFPPLRFSVDALVAYTKNLLWISQHVPQIRALLWKLLVSKMTSIDVEIKLADPNSIDL
EQMQVWKREQLALLARQLEKGAVAPSVVQSILGEPQWFCLMYEKVRSEEDIDIMAAKLDG
LMRVSFSFLQCFIPQLSGKPAPPGAYREEEDERESVGSPSSRSSVADYSPCVDDEPKEEK
KRTGTSEKDPRGDSERRSCSEERRDSPSPFSPQSILSPQPAVTSPQLASTSPRGGPSAFP
ASRHTTLAPRDPRRLLSPALSPAPAWPPDAARGPPGLRDRSRETRRDKKPLTEADVLVYE
LMDVFVEVVLPVHKCKYVQFLVFYLANLRVEWAGRLMSLLFRMLFDRQQHMLLRRISAVY
ISSFLCRALLVPPRFVRLALHHFLQLLHRGFLMTGTPNAPRQQQRLLGLLRAQHQTVYNP
ESPLALFYTVCQSCCYILCYHLDALAKSAPSLAFLKERNTSVAALLTSPLRPLMHIKRGI
AREFVAACRRVGSLDSSSDFENALKEVQLRDPPPSSCYRSSAGENEEEEEGREEREAERG
EDEKERGKRISQVDAVSSNDLLSDVLWLFDPLDAFFPFDRYLLRHSGRFIANKYRDWSAV
VAFVMQREEEKKKGTDGPDSRDPDGETDKGAEPDREKQRGLSAAKSPADQEERQDARSVS
SPSLEPTAAAQNLGEKLRRAEEAQLRNEEAPSRRSQGEENGQEDLDDAGVLFLTVDEEGT
DSDAEKEEANQGEKATGPAVPAGAEDKKTQGAGASCAAGGDEDAASGTKEKGELDDENPT
PSLTAEKSANHTPPIVTQQPQHNLSRELATSEMGALQQLVQDSLGFASVSRELEAKVRQR
AGSSSGAAKLREERRATLAGVREKKRQGFDEEAETGRTDEGDGVFASGSPELGEAAVATG
EEGGCGEGRERERGDAEEEGEEEEGDDERCIGNESDDEGWGDGKWDSLSALFSDEERELE
ERDFQEDREEESDGRTERALPVPSSEREDPETMTADEAGDQETQARRHLHAQSSCDSSST
CPGQIPKNVGPSLRRSRVREAKREFSFLAPRVAASIADQLELEVDAVGDEALSQSNLCLL
RHQSCLSRASMLDIFLSSQAYRPAPASPVVSAAASPFLMPSQSPPLTDLAKPQERQRDPL
ASPPTLAIVGEPTEPVPVNFVLTPAASFVSPSVAFSSAGFKGTEVESEANRVVDGCEERW
KRQLSSARSEERGTGGADASLLIVSTSMPSLSLGVIQEHDGEAGADDANEKIEESEKGET
EEAQCFRDREKSGKRNGRRRSADAVDESVDGEEAREATRQETEVTKTRLKRRHTVDAFAG
FPSRPPSGIRGMPSGEKPEKKALAEVAASGTCPSRSPEGGPEASGEASEREASRDAEEEE
ACLVRDRGEAEAERETEAGGYAGTHQSDETEVDQTAAVTGEKRGKNEGEKRRKKKGEKDK
AEKGLEKRARDAEHHEQEAPEEAEHPHPAADKSDAGKATTGHKQKMAPSSSAGQREVEER
LPSICVLPCLRETGGSSSPGSSSVSSSSGTSSQSPLSFSPSALSPSLLSASSYLQPPRPS
ASPTAYRSECGVQGTQLGGDSPFSLGSEDRKVSQLDRVLHSLREREEQLKAQQAEVQRTQ
EALMKMLLHEKQKREERRKKKERRRQEAAKTQGDSDVETDLRRQSEEPSVSESGLKKVEP
AAEEEEEREGESPASGGASKKTVCRGAGQKQTGEAPSDNDGHVLSTASVDQPGTAERGKK
KTSKKKEREHLEEEAIKGSVSGGNLAEIGAGEPVEPKLRKKRAEGEQRRSGDEQVDAAEE
DLKKYRKKKEKEGKASSKNVEAIAERAESGSERGVSPESRPVLLEQEEWRTGEKKQKGRK
LASEAKGHSSAGTLELRDALRGLESANEEGTERKKKRKRKPKCLREDAVAGEQATETAPG
SPPEDRPDVTDETAPVVETSHGVPTSENATEKKKRKKKGKVEEVAGDPAGEDSASAVCRT
EELALASEEVYFRGTGQTVDSATGIGEESVERKKKKSKGKKQEEAGNAPRVAGEARSREE
EVLDAGGEQETAGETESGCTGVEEGKKKRKKKKKREVREEEEPEGEDGEKKAKTKRKRTH
AEKAVAGQNNGQSGEAEEGEGASTETGGEQKGGGKEGRKIQARRFAEICGEGSTTAAYTN
QEAARGKVTLDEERRGTEHDRRQAESNSELLHGEGESGKKKKKKKVRLALMEAGEEAKAQ
ELAAEEVDATPMAYETSPVLEEETIMNEKQKKKNKKKRKREETGAVQEGTPATVADQDTS
AASNSPAEGTERDKEKVKQLKKKRKHEERV
NT seq
9453 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcgccgcggcagtccttgggaactcttctgcaggatcgcggggggcgacgc
tctcgtcggagtagcgataacgaaacagttttggattcctcgttttccctcttcccaccc
tctcctgtcactggacccgcagacagcgcacagggtcgaatgtgtccttctctccctgct
tctccacagctctcttcttctcagtctcgcctctctgctctccttttttctcttccttct
tctctcccttctgcacctcggccagcgtctcttgagtcgctcgcagaccgcagctcggta
cccttgcaaaagaagcaaggggtcgaggagggagaaagaggagcaggcagtttagcatct
gcttgcgaaggacaagacgaacaaaggcgggggtctctggaggccgcgaggtcgcacatg
tcggtctcttccattccagagcaaggcgcagattcgccgaacgtggattttcacgaagag
gacgccaaagtgtcgagagcttcggcggcctctcgagagagacgaacgacggtgaaggac
tccccgaaagacgacgacaccgcgttgtctttcccagatccgcccagctctcccggtgct
cgattcaccgtttcgcgggcgtcttcgccttcgttagcatctcgtcggagtcggtcccct
gacacgcagttgcccttcgcacgacgcactctttcttgctcttctaccagcgcatcccgt
tctcgcgcctccgtgggcgacgcgcgcctcttctcttcttcggcttgttcgcgctcttct
ccccctctctctcctcccggcgagaccagcgggacgcctctcttgcgcccaaccgcagac
ccgccgtcgtctgcttttccttcttcgactcccttctcttcttcttatccgctggggccg
gcggtgggtctgcgacgtacgcgagcgatctctgtccacccttcgtttcctggggcgtct
ccgccggtctctgcactggagcggccgcgaggcgcctcttcgctgctgcctttctcgcct
cccaatacagcgtcagacgttttgtctccgcctccagacctcgtgctgtctccggcgtgt
gggccttcgccgcgtctgaagggcgcggagcgcccacccgcgttttccctgctgtctccg
cccatggccgcggagcgcaggtccggacgccgaggctctgtccccttctcgccgccgagt
gcatgcacggacgtgctgtctccgcctccggaccttctgtctccgtacagtccgctcccg
cctctgttgaaagagagcgagaagccgcctggaggccgcctaggaggccaaggcgacagg
tctgggagctcgagaggcgtctccgatgcgccgcagctcttcacgtcaggtccgacgcga
caggagaagccagcggcgtcgtccttcttcttcccgccgcctccttcgccattcggcgga
aacgcctctgtcctgcggctgggcgcctggctagctgagcgcccaggcctcgacgacgac
cgcttcactccccttctcgagagttttctgctgcactttgacttcctcgcagcgggaaaa
gtttccaggcgaatccagcaggaccagcagatccagagagatctccgactgggcgaagac
gaagaaggcgaagtctcgttcttccgtccagtcgggagacacaccgacgagaaaagcgaa
caaacgcgtacgggcaagcgagaagaggaccgggaaaggaaggggcagaccgaccaactc
gaggaattcgaaaccacccttctggacattctcagcctacgaggcggaaacggagtcgac
acttccgtcgacatcctcgtcggacaactccgagaaaaacctcaccgtcacaaagccgcc
ggagaggagggaggcggcgagcctgcaggaggcacgacagggggaatacgaatcggcgaa
aagtttttcttcgccgacaaagttgccctcaagtctcgtctccgccaaatcttgcaagca
tgtgacgacgaagaagaactgcgtggagacgacttcgagctggtgaagggcgtcctcgaa
ttccacccaaaggcgaagcgaaaaatgcaaaacctctctgggctcttcgtctccacccac
ccgaatccgaagtttcgcgccacacggtgcttcttcattcggcggacaatccacgcttcg
ccctcctcgtcttcctcctcgtcttcctcctcgtcttccgcgtctccccccccagggact
gtcaccccagagggcgtagcgaccgcagacgagaacgcgggagagcgagcagccgcggcg
ctggctggatccgatcagaagccaggcgagaagagggaagaacaagaggaacgggaagaa
gggcagaccaaggcagaggaacagacagacgtccaagaggaatgcgaggatttcagctac
gtgcgatgcgtggataatatgctggaagatgattcgcaggctgatcgccttatctgccat
attctgaagcagctcgcggaggcgtttccaggatgcgtcgcccatttgcacgaagcgctg
cgtcgcaactttccgccgttgcgtttctcagtcgacgcccttgtcgcctacacaaagaat
cttctatggatttcccagcatgttccacagattcgagcgttgctgtggaagctgctggtg
agcaaaatgacgagcatcgatgtcgaaattaaactggcagacccgaactcgatcgacctc
gaacaaatgcaagtctggaagcgcgaacagttggcgcttcttgcacgtcaactggagaag
ggcgcagttgcgccaagcgtcgttcagagcattttgggtgagccgcagtggttctgtttg
atgtacgagaaggtccgaagtgaagaggacatcgacatcatggcggcgaagctggacggc
ctcatgcgcgtctccttctcctttctgcagtgcttcattccacagctttcagggaagcct
gcgcctccgggcgcttatcgagaggaggaagacgagcgggagagtgtggggtcgccttct
tcgcgctcctccgtggcggactactcgccctgtgtcgatgacgagccgaaggaggagaag
aagcgaacaggcacgagcgagaaggacccccggggcgactccgagcggcgcagctgcagc
gaggaacgcagagacagtccctcgcccttctccccacaaagcattctgtctccccagccg
gcagtgacgtctcctcagctcgcgtcaacgtcgcctcgaggtggaccgtcggctttccca
gcgagcagacacacgacgctcgcgccgagagatccgcggaggctcctgtctccggcgctg
tctccggcgccggcatggcccccggacgcggcccgaggcccaccagggctccgcgaccgt
agtcgcgagactcgcagggacaagaaaccgctgactgaagcagacgtcctcgtctacgag
ttgatggatgtcttcgtcgaagtcgtgctccctgtccacaagtgcaaatacgtccagttc
ctcgtattctacctcgccaacctgcgagtcgagtgggccggtcgcctcatgtcgcttctc
ttccgcatgctcttcgaccgacaacaacacatgctgctgagacgcatttcggcggtgtac
atttcctccttcctctgtcgagcgctcctcgttccgccgcgcttcgtccgtctcgctctc
caccactttctccagctccttcatcggggcttcctcatgactggaacgccgaacgcaccc
agacaacaacaaagacttcttggccttctaagagcccaacaccaaaccgtctacaaccct
gagtcgcctttggcgctgttttacacggtttgccagagctgctgctacatcctgtgttac
catctggatgctctggcgaagtcggcgccctctctggcgtttctgaaggagaggaatacg
tcggtggctgctctgctgacctccccgctgcggcccctgatgcacatcaagcgcggtatt
gcacgcgagttcgtggctgcatgcagacgcgtgggaagtctagattcgagcagcgacttc
gaaaacgctttgaaggaagttcagctacgagacccgccgccgtcgtcgtgctaccggtcc
agcgctggagagaacgaggaggaagaggagggacgcgaagagagagaagctgagagagga
gaagacgaaaaagagagggggaagcgcatctcccaggttgacgcggtgtcctcaaacgac
cttctaagcgacgttctgtggctcttcgaccctctggacgccttcttccccttcgaccgc
tacctgcttcgccactccgggagattcatcgccaacaaatatcgggactggagcgccgtc
gtcgccttcgtcatgcagcgcgaggaagagaagaagaagggcaccgacggcccggacagc
agagaccccgacggcgagaccgacaaaggcgcagagccagacagagagaaacaaagaggc
ctgagtgcggcgaagtcgcctgccgaccaggaggaaagacaggacgcacgcagtgtgagc
agtccgtctctggagcctacagcggccgcccagaacttgggagaaaaactgaggagggct
gaggaagcgcagttaaggaacgaagaggcaccctcgcgtcgctctcaaggggaggaaaac
ggacaagaggatcttgacgacgcaggcgtcctgttcctgaccgttgacgaggaaggcaca
gactcggacgcggaaaaagaggaggcaaaccaaggagagaaagcaacaggtcctgcagtc
cccgcaggagcagaggacaagaaaacgcagggcgccggagcctcatgcgcggcaggtgga
gatgaagacgcggcgagcggcacgaaggagaaaggcgagctggacgatgaaaacccaact
ccctcgttgactgcggagaagtccgcaaaccacactcctccgattgtgacacaacagccc
cagcacaatttgagccgcgagcttgccacctcggagatgggtgccctccagcagctcgtt
caggattctctcggcttcgcgagcgtcagcagagaactggaagcgaaagttcgacagcgc
gcaggctcgtcgagtggcgcagcgaagctccgagaagaacgcagagcgacactggcaggt
gtgcgcgaaaagaagagacagggctttgacgaagaagcagagacaggcaggacagacgaa
ggcgacggcgtcttcgcctctgggtcaccagagcttggggaagcggctgtggcaacgggc
gaagaagggggctgcggtgaaggccgcgagcgagaacggggagacgcagaggaagaaggc
gaagaggaagaaggagacgacgaaagatgcatcggaaacgagagcgatgacgaaggctgg
ggagacggcaagtgggacagtctctcggcgcttttttcagacgaagaacgcgaattggag
gagagagacttccaagaagacagagaagaagagagtgacggtcgcactgagcgagccttg
ccggtgccgtcttccgagcgagaagacccagaaaccatgaccgcggacgaagcgggcgac
caagagacgcaggcaaggagacaccttcatgcgcagtcgtcctgcgactcctcgtcaaca
tgtcccggacaaatcccaaaaaacgtcggcccttccctgcggcgttccagagtccgagag
gccaaacgcgagttctcctttctggcgccgcgggtcgctgccagcatagctgaccagctc
gagctggaggtggatgcagtcggggatgaagctctctcccaatcgaatctttgtcttctt
cgtcaccagtcgtgtctaagtcgggcgtcgatgctcgacattttcttgtcttctcaagcg
tatcggcccgcgcctgcttcgccggttgtctcggcagcggcgtctccgttcttgatgccg
agtcagtctccgcctctgacggacctggccaagccgcaggagagacagcgcgaccctctc
gcgtccccaccgacgctcgcaattgtgggcgagcctaccgagccagtgccagttaacttt
gttctcacacctgcggcttccttcgtgtcgccgtctgtcgcgttttcgagtgcgggattc
aagggcacagaagtggagagcgaagcgaacagggtcgttgacggctgcgaagagagatgg
aagcggcagctgagttctgctcggtcggaggagcgagggacaggcggcgcagacgcctcc
ctgctcatcgtctcgacctcgatgccatcgctgtccctcggagtcatccaggaacacgac
ggcgaggcgggggcggacgacgcgaacgagaagatcgaggagagcgagaagggtgagaca
gaggaagctcagtgctttcgcgacagagagaaatcggggaaaaggaatgggaggcgaaga
agcgcagatgcagtcgacgagagcgtggatggcgaagaagcgagagaagcaactcgccag
gaaacagaagtcactaaaactcgcttgaaacgaagacacactgtcgacgctttcgcaggg
tttccttctcggccaccctccgggattcgtggcatgccaagcggggagaaaccggagaag
aaagcgcttgctgaggtcgcggcttcagggacttgcccttcgagaagcccggagggcggt
ccagaagcctcaggcgaggcgagtgagcgagaagcaagccgcgacgcagaagaggaagaa
gcatgtctggtgcgggacagaggcgaagcagaggccgaaagggagacggaagccggtgga
tacgcaggaacgcatcagagcgacgagacggaagtggaccaaacagctgcggtgacagga
gagaaacgtggaaagaacgaaggagagaagagacgaaagaaaaagggagagaaagacaaa
gcagagaaggggttggagaagcgcgccagggacgcagagcaccacgaacaagaagcaccg
gaagaagcggagcacccacatccagcggcagacaagagcgatgccggcaaagcgacaaca
ggtcacaagcagaaaatggctccttcttcttcggcagggcaaagggaagttgaggagaga
ctgccgtccatctgtgtccttccgtgtctccgcgaaactggcggaagctcgtctccgggt
tcttcttcggtttcctcgtcgtctgggacttcctcacagtctcccctgtcgttctccccc
tccgctctttctccgtctttgctcagcgcttcttcgtacctccagcctccccgcccttcg
gcctccccgacggcatatcgctcagagtgtggagtccaaggaacgcaactgggtggcgac
tcgccgttctctttggggtcagaagaccggaaagtctcccagcttgaccgtgtgctgcat
tccctgcgagagagagaagaacagctgaaggcacagcaagcggaagtccagcgcacgcag
gaggcgctgatgaagatgcttctccacgagaaacagaaacgcgaggaacgcagaaagaag
aaggagagacgcagacaggaagcagccaagacgcagggggacagcgatgtggagacggac
ttgcggcgccagtctgaagagccgagcgtctccgagagtggcctgaaaaaggtggagcct
gcggcggaggaagaagaggaaagagagggcgaatcgcctgcttcaggcggcgcgtcaaag
aagacggtttgtcgcggtgcaggacagaaacagacaggtgaggcgccaagcgacaacgac
ggtcatgttctctccaccgcgtcggtggatcagccgggtactgcagaacgaggaaagaag
aagacgtcgaagaagaaagagagggagcacttggaagaagaagcgataaaaggaagcgta
agcggaggcaatttggctgagataggggcgggagaaccagtggaaccgaagctcaggaaa
aagcgagcagaaggcgaacagagacgatcaggggatgagcaggtagacgcggccgaagaa
gatttgaagaaatatcggaaaaagaaggagaaagagggaaaagcttcgtccaagaatgtg
gaggctatcgctgagagggcagaatctggaagcgagagaggcgtgtcaccagagagcaga
ccggttctgttggaacaggaagagtggagaaccggggaaaagaagcagaaggggcggaaa
ttggcgagcgaagcaaaaggccattcgtccgcaggaacactggagctgcgcgatgctctc
cgaggccttgagtcggcgaatgaagaaggaacagaacggaagaagaaaaggaaaaggaaa
ccaaaatgcctccgggaggatgcggttgctggagaacaggcaacggagacagctccggga
tccccccctgaagatcgacccgacgttacagacgagacagcccctgtcgtcgaaacatca
catggcgtgccgacgtcagagaatgcgacggagaagaagaagagaaagaagaaaggaaag
gtcgaggaggtggcaggcgatcctgccggcgaagactccgcgtctgccgtttgtagaaca
gaggaacttgccttggccagtgaagaagtgtatttcagaggaacgggacagactgtagat
tcagcaacaggaattggagaggagagtgtggaacggaagaagaagaaatccaagggcaag
aagcaggaagaagcaggaaatgcgccacgcgtcgctggtgaggcgcgttcgcgagaggaa
gaggttctcgatgctggcggtgaacaagaaaccgcaggagagacggagtcaggctgcaca
ggcgtcgaggaaggaaagaagaaacggaagaagaaaaagaaacgagaagtacgagaagag
gaagaaccggaaggggaagacggagagaagaaagcgaagaccaagagaaaacgaacacac
gcggagaaagctgttgccggacagaacaacggccagtctggtgaagcggaggaaggagaa
ggagcctcgaccgagacgggaggagagcaaaaggggggtgggaaagaaggacgaaaaatt
caagcgagacgattcgccgaaatctgtggtgaagggagcacaactgctgcctacacgaac
caagaggcggcgcgaggaaaggtgacactagatgaagaaagaagaggaaccgaacacgac
cgcaggcaagcggagtccaattcagagcttctgcacggtgagggcgaaagcggcaagaag
aagaagaagaagaaagttcgcctagcgttgatggaggcaggcgaggaagcaaaggcgcaa
gaactggcggccgaagaagtggacgccacgccgatggcttatgaaacatcgccggtttta
gaggaagaaacaattatgaatgagaaacagaaaaagaagaataaaaagaagaggaagaga
gaggaaacaggggcagttcaagaagggacaccagctacggtcgcggaccaggatacgtct
gccgcgtccaatagccctgcagagggaacagaaagagataaggagaaggtgaagcagcta
aagaagaaacgaaagcacgaagaacgtgtatga
DBGET
integrated database retrieval system
