KEGG   Toxoplasma gondii: TGME49_243540
Entry
TGME49_243540     CDS       T01093                                 
Name
(RefSeq) WD domain, G-beta repeat-containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_243540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgo03041]
    TGME49_243540
Spliceosome [BR:tgo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    TGME49_243540
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP PRP4 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD_LRWD1 PEP5_VPS11_N Nbas_N Beta-prop_ELP1_1st MIOS_WD40 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 7901146
NCBI-ProteinID: XP_002366853
UniProt: S8F6Y9
LinkDB
Position
VI:complement(join(2692892..2693533,2694166..2694450,2694954..2695872,2696361..2696650))
AA seq 711 aa
MESASPAGSGQAPGVAKSFHDGPREKSHIYFGPVSAAAPEGVAAVSDVVGEVDASPPDDG
EEPAVQKQQELLKRFEVQQKASNFQAVCPTHDRTVRKVLRALGHPICLFGEGPFERRQRL
KVLFAEGVSLSPEELQNFTLEDESLSRAARVEEASAEDVAEDELFFTEGTESLLEARRLM
FGDSVRRARLRLRQEQQLKRDVPKPLSFKSQAALLLPSASSPSLSPLPKDSVLRRVCQFC
SHLQSQLAVRASQVGDDRPLTCCRFSPGSSRLLRFSSRPDIATKATEEGSEETGEAPLKR
VKTERGESDTAEADRRKAAREEGVSCLGEKASDLIADPHLQESWGGDSQFLATSSWNEVV
KLWSAQEGELLLELRGHTGRVHALAWRDTPEGEAPSDSDKVEKGGVPLLLASGGADGGIC
LWDIHRLQPRNCAGLASSAKTSSSNQNSRELLVCKLEGHEDRVNRVAFHPSGRFLASTSH
DETWRLWDVEKQQELLLQEGHAAAVYGVSIHPDGSLIATTDLSGVVRVWDLRTGRTVMPL
VGHVKQVVSAAFHPILGNLVATASDDHSVKIWDLRKGLSKQSQSSLAGSNHGPHPGSSSH
SNKPSSNVVTTVLAHNKLVTEVLFEPVYGRCMYTSSFDGLVKVWSVNDFACLKTLAAHEG
RVMSMDVMKGGETLASVGFDRTWKLWKCGARFCAPRPSTEKTGETAAKSEA
NT seq 2136 nt   +upstreamnt  +downstreamnt
atggagtctgcgtcgccagctggcagcggccaagcgcccggggtcgcgaaaagcttccac
gatggacctcgagaaaaatctcacatttacttcggcccagtctctgctgcagcgcctgag
ggagttgcagctgtctcagacgttgtgggcgaagttgacgcatcgccacccgacgacgga
gaagaacctgctgtgcagaagcaacaggagcttttgaagcgtttcgaagtccagcaaaaa
gcctcgaacttccaagcggtctgtccgacgcacgaccgcactgtcagaaaagttttgcgc
gcactcggacacccgatctgtctctttggcgagggccctttcgaacggagacagcgactg
aaggttctcttcgcggaaggtgtctccctctctccggaggagctgcaaaactttacgctg
gaggacgaatcgctctcgcgagcggcgcgcgtcgaagaggcctcagcggaagacgtggcg
gaggacgaacttttcttcacggagggaacggagtcgctcctcgaagcccgtcggcttatg
ttcggggacagcgtgcggcgcgcgcgtctgcgactgcgacaggagcagcagctgaagcgg
gacgtaccgaagcctctgtctttcaagtctcaggccgcgttgctgcttccctctgcttcc
tccccttctctctcgcctctgccaaaggactccgttctgcggcgcgtttgccagttttgc
tctcacctgcaaagccagctagctgtccgtgcatcgcaggttggcgacgaccgtccgctc
acgtgctgcagattctccccaggaagctcgcgtcttctccgtttctcttcgcgccctgac
atcgcgacgaaagccacggaagaaggaagcgaggagacgggtgaggcgccgttgaagcga
gtaaagacagagcgtggagagtccgatacggccgaggcagacagaaggaaggcggcgagg
gaagagggcgtgagttgcttgggagaaaaggcatcggacctaatcgcggatccccacttg
caggagtcgtggggtggagactctcagttccttgctaccagcagctggaacgaagtcgtg
aaactctggtcagcacaagaaggggagcttttgctggaactgagaggccacacaggacgc
gtgcatgcgcttgcctggagagacactccagagggagaggccccgtcagacagcgacaaa
gtcgaaaagggcggcgttcccctgcttctggcgagtggcggtgcggacggggggatctgt
ttgtgggatattcaccgcctgcagccgcggaattgtgctggcctggcgtcttctgcaaaa
acttcaagcagcaaccagaacagtcgagagctgctggtctgcaagctggagggtcacgaa
gatcgagtcaaccgcgtggctttccatccctcggggcgcttcctggcttcgacttctcac
gatgaaacctggagactgtgggacgttgaaaaacagcaagaacttctcctccaggaaggc
cacgctgcggcggtgtacggggtgtccatacaccccgacggctcgctgattgccaccacg
gatctgtcgggggtcgtgcgagtgtgggatctgcgtactggccggacagttatgcctctc
gtgggtcacgtgaaacaagtcgtttcggctgcgtttcacccaatcttggggaatctcgtg
gcgacggcgtcggacgaccactcggtgaagatttgggatctgcgcaaggggctgagcaaa
cagtctcagagcagcctcgctggctcgaaccacggcccgcacccgggcagttcctctcac
agcaacaaaccgagttcaaacgtagtgaccaccgttctcgcgcacaacaaactggtcacg
gaggtcctgttcgagcccgtgtacggcaggtgcatgtacacgtcgtcgttcgatggcctc
gtcaaagtttggagcgtgaacgactttgcgtgtctgaagacgcttgccgcgcatgagggc
agagtgatgagcatggacgtgatgaagggcggggaaactctcgcgagcgtcggcttcgat
cggacctggaagttgtggaagtgtggcgcgcgcttctgtgcacctcggccctccaccgaa
aagaccggagaaaccgccgcaaaatctgaggcctag

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