KEGG   Toxoplasma gondii: TGME49_247250
Entry
TGME49_247250     CDS       T01093                                 
Name
(RefSeq) RbAp46
  KO
K10752  histone-binding protein RBBP4
Organism
tgo  Toxoplasma gondii
Pathway
tgo03082  ATP-dependent chromatin remodeling
tgo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TGME49_247250
   03083 Polycomb repressive complex
    TGME49_247250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tgo03036]
    TGME49_247250
Chromosome and associated proteins [BR:tgo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     TGME49_247250
  Histone modification proteins
   HAT complexes
    HATB complex
     TGME49_247250
   HDAC complexes
    Sin3A-HDAC complex
     TGME49_247250
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     TGME49_247250
    PRC2.2
     TGME49_247250
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     TGME49_247250
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TGME49_247250
  Chromatin remodeling factors
   NuRD complex
    TGME49_247250
   NuRF complex
    TGME49_247250
   NuRF complex (fruit fly)
    TGME49_247250
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_EIPR1 WD40 Beta-prop_EML WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WDR54 WD40_RFWD3
Other DBs
NCBI-GeneID: 7897966
NCBI-ProteinID: XP_002367092
UniProt: A0A125YMQ5
LinkDB
Position
XII:complement(join(3194566..3194625,3195174..3195221,3195718..3195792,3195998..3196213,3196517..3196603,3196738..3196780,3197215..3197326,3198008..3198117,3198460..3198538,3198830..3198888,3199436..3199517,3199890..3199953,3200615..3200696,3201066..3201946))
AA seq 665 aa
MPTAPKNAASPAGDVATTKDAVPFTRVSCSPLAPSVVRHPRSEVQLDRGGAQNASEAIRT
ESDKEATRRATSGHSPSSAASEQEGNAMTGEEATRPLALEPQTPASAETTAEAEATDAKQ
TAPSVPVLPLSVSASLLPTFSLSSPKNGGLEQAPVPGKRPVTDEAVSPSASRKRLRKPDG
KELPDAAKATENAEHNALCDAHAQSSQPVCTADAPRSPSGRRLRTVPEEGEDNEESDGEK
EDEEEGDRNDPAVIAEEFNNWKVNTKVLYDLVMNYTLEWPSLTVQWLPGLTTKTGAASVS
QRLLIGTHTSSGDDNSLLVLQVSLPAKPIEDEAARTYVERPTDYDGFSFGLLPCKFKTVK
SFPHEGEVNVARFMPQKADIVATMGPQGFVSIYDLSMDSAHSEGAVLKLPGHTTDGFGLA
WNAMVHGRLASTSNAGAICLHDVQAAPAASAADAPLRTWTVSKGAVNDCCWIPGEAALLA
SCGDDGIVSVWDIRDDSPNSAAVQFKASEADLLTCLCADEQQPNTIVCGDNRGHLRVFDR
RRGEKPVHMVDAAHDGEVTRVAFAGCEAGLLSSAGRDRFVSLWDLKKVGEEQSEEDAEDG
PPELLFSHGGHVAAVSDMAWNREDLASLDKVVASVGEDNRLQIWQLKRSVFFCADDEDNE
DDDVE
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgccaactgcgcccaagaacgcggcctctcctgctggtgatgtggctacgacgaaagac
gctgttcccttcaccagagtctcctgttctcctctcgccccttctgtcgtgcggcaccct
cgcagtgaagtgcagctcgatcgaggaggcgcgcagaacgcgagcgaagctatccgaaca
gagagcgacaaagaggcgacgcgacgcgccacctcgggccacagtccttcctctgccgca
agcgagcaagaagggaacgcaatgacaggcgaagaagcaacgcgccctctcgcgttggag
ccgcagactccagcttctgcagaaaccacggcggaagccgaggcgaccgacgcgaagcaa
actgcgccctccgttccagtccttcctctttctgtctctgcgtcgctcttgccgaccttc
tctctctcctccccaaagaatggaggactcgagcaggcgccggtcccgggaaagcgaccc
gtgaccgacgaggcagtttcgccctctgcgtcgcgaaagcgcctgaggaaacctgatgga
aaagagctccccgatgcagcaaaggcgacagagaacgccgagcataacgcactctgcgac
gcgcatgcgcagagctcccagcctgtatgtacagcggacgcgccgcgctcgccgagtggg
cgacgcctccgaacggtgcctgaagaaggcgaggacaacgaagaaagcgacggagagaag
gaagacgaagaggaaggagaccgaaacgaccctgctgtcattgcagaagagttcaacaac
tggaaagtcaacaccaaagtgctctacgacttagtcatgaactataccctcgagtggccg
tccctcacagttcagtggctgccggggctcaccacaaaaacgggcgctgcatcagtgtct
cagaggcttctcatcgggacccacacgagtagcggcgacgacaattcgctcctcgttctt
caggtgtctctccctgcgaagcccattgaagacgaggcggcgcggacgtacgtcgagaga
ccgacagactacgacggattcagcttcggacttcttccgtgcaaatttaaaactgtcaag
agtttcccccacgaaggagaagtgaatgtcgcgcgctttatgccccagaaggcggacatc
gtcgccaccatgggtccgcaaggcttcgtgtctatttacgatctgtcgatggattcggcg
cactcagagggggctgtgctgaagctgcctggtcacaccacagacggctttggcctcgcg
tggaatgccatggtccacggtcgtctcgcctccacgtcgaatgcaggcgcgatttgcctg
cacgacgtccaggcggcgcccgctgcttctgctgccgacgcacctcttcgcacttggact
gtctcaaagggagccgttaacgattgctgctggattcccggagaagctgctctgctcgcg
agttgcggggacgacggcattgtcagtgtgtgggacatacgcgacgacagtccgaactcc
gcagccgttcaattcaaggcgtcggaagcggacctcctcacctgcttgtgcgcagacgag
cagcagccaaacacgatcgtctgtggagacaatcgcggtcacttgcgggtgtttgaccgc
cggcgcggagaaaagcctgtccacatggttgacgcggcgcacgacggcgaagtgacgcgg
gtcgccttcgccggctgcgaagctggacttctttcctcagccggcagagaccgattcgtc
tctctctgggacttgaaaaaagtcggagaggaacagtcggaggaagacgctgaagacggt
cctcccgagcttctgttctcccacggcggccatgtggcggcagtcagcgacatggcgtgg
aaccgcgaagatctcgcgtctcttgacaaggtagtggcgtccgtcggcgaggacaatcgg
ctccaaatttggcagctgaaacgctcggtctttttctgcgccgacgacgaagacaatgaa
gacgacgacgtcgaataa

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