Entry |
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Name |
(RefSeq) SNARE domain-containing protein
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KO |
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Organism |
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Pathway |
tgo04130 | SNARE interactions in vesicular transport |
|
Brite |
KEGG Orthology (KO) [BR:tgo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
TGME49_247930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:tgo04131]
TGME49_247930
Membrane trafficking [BR:tgo04131]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
TGME49_247930
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
XII:join(3625672..3625828,3627120..3627208,3628447..3628498,3629057..3629169,3629844..3630012,3630496..3630560,3631158..3631223,3631403..3631480,3631680..3631832,3631988..3632017)
|
AA seq |
323 aa
MAATLAARNITSQFLKYRMEYKSKKHRFGRSLLGTTHVSSGNAVISSPISSRGRQRLLSY
QSDEDEGVEMTTTSQQQLPPLWADMVEEAHDDVEQIKEKMSQLQKAQQRRLLKVFEDGEG
QANPDLEIDALTANLTHLFKRCEGRVQQICVTQTPDSDTRCDQLLQQNAQRSIAAQLQAL
NAAFRSQQKTYLAEVKRRTHGEDIFGSSDSASGDTGFADDLTSELALMEQDADLRQGELA
KIAQSMTDLHQIFKDLNSLVIDQGTILDRIDYNVEQVLQNTAQANVQLRKAEENQRSGRA
AQCIVFLVITIFFLLVLLIMKHT |
NT seq |
972 nt +upstreamnt +downstreamnt
atggcggctacactagcagcgaggaacatcacctcccagtttctgaagtaccgcatggag
tacaaaagcaagaagcatagattcggaagaagtcttctcggcacaactcacgtctcttca
ggaaacgccgtcatttcttctcccattagctcccgaggacgacagaggctgctttcttac
caatccgatgaagatgaaggagtagaaatgactacgacaagccagcaacaactgccgcct
ctctgggcggatatggttgaagaggcgcacgacgacgtggaacaaatcaaagaaaaaatg
tctcagctccagaaggcgcagcagcgacgcctgctcaaagttttcgaggacggagaaggc
caggcgaatccggacctggaaatcgacgctctcacagccaatctcacccacctcttcaag
cgatgcgaaggacgcgtgcaacagatttgcgtgactcagacacctgacagcgacactcgg
tgtgaccagctgcttcagcagaatgcgcagcgaagtatcgctgctcagctgcaggcgcta
aatgcagcttttagaagtcaacagaaaacgtatcttgcagaggtcaaacggagaacccac
ggggaagacatctttggatcgtcggacagcgcgtctggagacacaggtttcgccgatgac
ttgacgtccgagcttgctctgatggagcaagacgcagatctgcggcaaggggagcttgct
aaaattgcgcagtcgatgacggatctgcaccagatcttcaaggacctgaacagtcttgtt
attgaccagggaacgattcttgatcgcatcgactacaatgtcgagcaagttctccagaat
acggcgcaagcgaacgtgcaacttcgcaaagctgaggaaaatcagaggagcggacgcgct
gcgcagtgcatcgtttttcttgtcatcaccattttctttctgctcgttctgctgatcatg
aaacacacctaa |