KEGG   Toxoplasma gondii: TGME49_257180
Entry
TGME49_257180     CDS       T01093                                 
Name
(RefSeq) RecF/RecN/SMC N terminal domain-containing protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tgo  Toxoplasma gondii
Pathway
tgo03440  Homologous recombination
tgo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TGME49_257180
   03450 Non-homologous end-joining
    TGME49_257180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgo03032]
    TGME49_257180
   03400 DNA repair and recombination proteins [BR:tgo03400]
    TGME49_257180
DNA replication proteins [BR:tgo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    TGME49_257180
DNA repair and recombination proteins [BR:tgo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     TGME49_257180
    BRCA1-C complex
     TGME49_257180
   NHEJ (non-homologous end-joining)
    MRX complex
     TGME49_257180
SSDB
Motif
Pfam: AAA_23 AAA_15 AAA_21 SbcC_Walker_B ABC_tran AAA_29 AAA_13
Other DBs
NCBI-GeneID: 7898766
NCBI-ProteinID: XP_018636969
UniProt: S8F6W7
LinkDB
Position
VIIb:complement(join(4157141..4157335,4158020..4158303,4159123..4159198,4159554..4159651,4159981..4160540,4160944..4161087,4161483..4161661,4161981..4162134,4162737..4162879,4163690..4163845,4165422..4166212,4166609..4166875,4167339..4167495,4168274..4168423,4168669..4168899,4169273..4169711,4170531..4170668,4171810..4172066,4173283..4173507,4174042..4174164))
AA seq 1588 aa
MATLERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTGELPPCVD
RGRGWVFDPRLLDAAEVKAQVRLRIHTKGGKELTVVRSMQLSQTVDRKGKTKATFKQLEP
YLQLKDSATGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVFCHQEESCWPLSDMQVLKK
KFDQLFGATRYVKALESIRAIRKQHVSAAKDRQHDLQLVAAHRRQARLLLRQLEEARALE
TEEEEQLRLTKAALETHASLLRSGEEAKEQEDEIKRNLQVASQLVQRLAAELADQQERQE
RERREEKERERQRRRTARIRLAERRRQEIERVEDSISRREQERDEAERARQAEEDEERVW
QKEEEEEEKFRVAVEQESYRELVELAKDIEQQFAAKKDRLAALEGELQARENESSALTER
LHAEQDRTAEAIRAEERRNGAAKERRRILEKLFKVLRADCHPQEHDDEEEETFQRFASRS
DREILEDVETQMMKLQNEKEVQGRDAMRVTEVLKLEARQLQRWREELASLQDRKARRRKK
EELERDIRGVAEEEERQRREEEAGSQTCAAKISEMEAALKRADEDLQKLRGRRRLLERRR
RVAEEQKERQMQLQLARQRIHDLEKEITEKEAKFLQDFQEVRDDLETEDSPLLHFGGTFE
EAATLVASAASRKEAEKAREHHRTVSASLNSCRGQAELGASSLRALLLPFCHNLLRAASF
SSQSFSAQSSSPASSPPDSSPSPAAPVASASGRQGDASEERPARSSAWPPHLGLLLKETV
RREREWGRDPSRRLVPSASTSSSLSPSSASAVSSSGSGDVRPEEDALCADARALLEIYEE
GRRSRAEADVAREDDTLKREAGHWAALYAISEAGGTNRLDCLVPHGWLRQLAKESEEASA
CALCRRVFLTRDELEKTMNEIEQRLQALPQQVRDAETRQREIQKQLDALQEERLLMATLA
KQKEEIAQKTTFLQTLRQNLHHLKGQVQAAARRAEEAERREEKIKKLVDASESLREVKTV
GRQKARGELEMKEAQLRAAVAAAAGDAGFEAIDETGSPLDLQSITKEFEACDEEQSKLYT
LRDATQARLNEAVRQRFVQQQRKEELRRRREDLRREEEELESLEHQISKTVDAMQAKERE
LPTQRRELASLERRLQEKNEQLRREEQRRGDTLRAVDASVEELSEQQHRLGEATHAVRQA
EAALREIREKKSTLAAELGRLQAKREEVNADISRMKKANEEQQKACARGQRFLTIVKNKV
ALLHRENELEQEKKKIDALAQQLRDGRRRRFTGASGRDGEDEEREEGTEDGEEGGGLERE
LRELRRKCEAEKEKKARLEGSLVTRRERVKEIEKELAGSAVYNDVEEKYRSALVDAEIEA
MAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTMYTGHDIDFIAIRSDTEEQTAG
APASLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMRGRCSAGQKILASLIIRLALAE
TFCVHCGVLALDEPTTNLDRFNCESLAKALAALVEARRTSASFQLILITHDEQFVMKLAR
HGLCDKFYKITKALSGDSRITCCDIQGF
NT seq 4767 nt   +upstreamnt  +downstreamnt
atggcgaccctcgaacgccttggcgttcagggcattcgctgctttgcgccagatcacttg
gaggtgattgcttttgagaagccgctcaccgtcatcgtcggccacaacggagcaggcaag
actacggttgttgagtgcctgaagttcgcgacgacgggggagttgccgccttgcgtggat
cgcggccgcggctgggtcttcgaccctcgcctgcttgacgctgcagaagtcaaggcccaa
gttcgtttgagaattcacacgaaagggggaaaagaactgacagtcgttcgatccatgcag
ctctcgcagaccgtagaccgcaaaggaaaaaccaaagccacattcaaacaactggagcct
tatctccagctgaaggactcggcgacgggacagaaagcttcgatcggcaacaagtgcgcg
gacatcgatttgcagttgcccggacttctcggcatccaccgcgcggtgttggagcatgtg
gtattctgccaccaagaagaaagttgctggccgttgtcggacatgcaagttctgaagaag
aaattcgaccaactctttggagcgacgcgctacgtcaaggctctcgagagcattcgcgcc
atccgaaaacaacatgtctctgcggcgaaagatcgacagcacgacttgcagttggtcgcg
gcgcaccgacgacaggcgcggcttctgctccgtcagctggaggaggcgcgggcgctggag
actgaggaggaagagcaactgaggctgacgaaggcggctctggagacgcatgcgtcgctg
cttcggtcaggagaagaagcgaaagagcaggaagacgaaataaaaagaaacttgcaagta
gcttcgcagctggtgcagcgacttgcagcggaacttgcggaccagcaggagaggcaggag
cgagagaggagagaagagaaggaacgagagcgccagagaagacgaactgctcgcattcgt
ttagcagagcggagaagacaagaaatcgagagagtcgaggactcgatttcgaggcgagag
caagagcgagacgaagcagaacgcgcgcgacaggctgaggaagatgaagagcgtgtgtgg
cagaaggaagaggaggaagaagaaaaattccgagtcgcagtggaacaggaaagctacagg
gaactcgtcgagttagccaaggatatcgaacagcaattcgctgcgaagaaagaccgacta
gcggcgttggagggagaactgcaggcgagagagaacgagagttctgccctaacggagcgt
ctgcatgcagagcaggacagaacggccgaagccattcgcgcagaagagcggcgaaacggc
gctgcgaaagagcgaagacgaatcctggaaaaactgttcaaagttttgagagccgactgt
caccctcaggaacatgacgacgaagaggaggagacgtttcagcgtttcgcttctcggtca
gatcgagagatcttggaagacgtcgaaacgcaaatgatgaaactgcagaacgaaaaggag
gtgcaggggcgagacgcgatgcgagtcactgaggtcctgaaactggaggctcgccagctg
cagcgctggcgcgaggagctcgcgagtctccaagatcgaaaggcgcggcgtcgaaaaaag
gaagaactggagagagacatccgcggtgtcgcggaagaagaggaacgtcagcgccgcgag
gaagaggcaggcagccagacttgtgcagcgaagatcagcgagatggaagcggcgctaaaa
cgagctgacgaagacctgcagaagctccgcggacggcgcaggctgctggagcgtcggcgg
cgcgttgccgaggagcagaaagagcgacagatgcagttgcagctggccaggcagcgcata
cacgacttggagaaggagatcacggagaaggaagcaaagttccttcaggattttcaagag
gtcagagacgacctcgagacagaagacagtcctttgctgcacttcggaggcacctttgag
gaggcagcgactctggtggcgtctgcggcatctcgcaaggaagcggagaaggcgcgcgag
caccaccggactgtctccgcgtcgctgaacagctgcagaggccaagcggaactcggggct
tcgtctctgcgtgcgttgcttctccctttttgccataacctccttcgcgcggcgtccttc
tcgtcacagtcgttctctgctcagtcttcgtctcctgccagttcccctccagattcgtct
ccgtcgcctgcggctcctgtcgcttctgcctctggtcgccaaggagacgcgagcgaggag
cgccccgcgcggagctccgcttggccaccccaccttggtctccttttgaaggagaccgtt
cggagggaacgcgagtggggacgcgatccgtcgcgtcgcctcgttccgtcggcgtccacg
tcttcttctctctctccttcttctgcgtctgctgtctcttcgtctggatcgggggatgtg
cgtccggaggaagacgctctctgtgcagacgctcgcgcgcttctggagatctacgaggaa
gggaggcgaagcagagccgaggccgacgttgcgcgcgaagatgacacgctgaagagagag
gccgggcactgggcggctctctacgccatctcggaagctggcggcaccaaccgcctggac
tgcttagtgcctcacggctggctccgccagctcgcgaaggagagcgaagaagcgtctgca
tgcgctctgtgcagacgggtgttcctcacgcgagacgagttggagaaaacgatgaacgaa
atcgagcaacgcctgcaggcgctgccgcaacaagttcgcgacgccgagacgcgccaaagg
gaaatccagaaacagctcgacgccttgcaagaagagcggcttttgatggcgacgctggcg
aagcagaaagaggaaatcgctcagaaaacgacttttcttcagaccctgcgccagaatcta
caccacctgaaaggccaagttcaggccgccgcgcggcgcgccgaagaggccgagcgcagg
gaggagaagatcaaaaagcttgttgatgcctcagagagccttcgcgaggtgaagactgtc
ggcagacagaaagcaagaggagagctggagatgaaggaggcgcagctgcgtgcggcggtt
gccgcggccgctggcgacgcgggtttcgaggccatagacgagacaggcagtccgttggat
ttgcagagcatcacgaaggagtttgaggcatgcgatgaggaacagtcaaagctctacacc
ctccgcgacgctacgcaggcgcgtttgaacgaggctgttcgtcagcgcttcgtccagcag
cagcggaaagaggagctgaggaggcgacgggaggatctgcggcgcgaagaagaagaactg
gagagtctcgagcatcaaatctccaaaacggtcgacgccatgcaggccaaagaacgcgag
ctgccgacgcagagacgcgagctggccagcctcgagcggcgtttgcaggaaaaaaacgaa
caactccggagggaagagcagcggcgcggagacaccctccgcgctgtggacgcttctgtc
gaagaactcagcgaacagcagcaccgactcggcgaggcgacgcatgcagttcggcaagcg
gaggcggctctgcgagaaatccgggagaaaaagtcgacgctggctgcagagctcggccgt
ttgcaggcgaagcgggaggaagtgaatgccgacatttcgcgcatgaagaaggcgaacgaa
gagcagcagaaagcttgcgcgcggggccagagattcctcacaatcgtgaaaaacaaggtt
gcgctcctccacagagaaaacgaactcgagcaggagaagaagaagatcgacgccctcgcc
cagcaactgcgagacggccgcaggcgacgcttcacaggtgccagcggccgagacggagaa
gacgaagagcgagaagaaggaacagaggacggagaagaaggcggtggtctggagcgtgag
ctgagagagttgaggaggaagtgtgaggcagagaaggagaagaaagctcgactggagggg
agtttggtgacacggcgagaacgcgttaaagagatcgagaaggaactcgcagggtctgcc
gtttacaacgatgtggaggaaaagtacagaagcgctcttgtggacgcagaaatcgaggcg
atggccgcgaaggatctggatcgctatcaccgcgctctggacaaggccttgatgaagtat
cactccatgaagatgcaggaaatcaatgcaacgatgaaggaattgtggcaaacaatgtac
acagggcacgacattgattttatcgcaattcgatccgacaccgaagagcagacggctgga
gcgcccgcctctcttttcggcaacgcctcttcttccgcctctgcaccagctgctgggcag
cgctcctacaactacagagtggtgatggtcaagggaggcgtcgagctggacatgcgtgga
cgctgttcagcagggcagaagatcctcgcctcgctgattattcgactggctctcgccgaa
acgttctgcgtccactgtggagtccttgccctcgacgaaccgacaacgaatctggatcga
ttcaactgcgaaagcttggcgaaggcgctggctgcgctggtcgaggcgcgaaggacgagc
gccagctttcagttgattctgatcacgcacgatgagcaatttgtgatgaaacttgcgaga
cacggtctctgcgacaagttctacaaaatcacaaaggccctgagcggcgattcgcgcatt
acttgttgcgatattcaaggtttctga

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