Toxoplasma gondii: TGME49_258980
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Entry
TGME49_258980 CDS
T01093
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tgo
Toxoplasma gondii
Pathway
tgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_258980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_258980
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TGME49_258980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF6597
Motif
Other DBs
NCBI-GeneID:
7901066
NCBI-ProteinID:
XP_002365112
UniProt:
A0A125YIK8
LinkDB
All DBs
Position
VIIb:join(3053087..3053487,3053943..3054058,3054409..3054611,3054996..3055228,3055743..3055860)
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AA seq
356 aa
AA seq
DB search
MMGVPPATGGSLASGEARSLPSPSSSSFSSSFASSASASEPAAASSAASASGQQGAAAAQ
TTGGQSSLSASVASSLPDKDHVCQLLLDLCVLEKREAALADLSKRREQYPDLAPLLWHSF
GTIAAILQEIIAIYPCLSPPTLTAAASNRVCNSLALLQCVASHPDTRQAFLNAHIPLFLY
PFLNTVSKTRPLEYLRLTSLGVVGALVKIDDAEVINFLLQTEIIPLCLRIMETGSELSKT
VATFIVQKVLLDDVGLSYICATAERFYAVSTVLCNMVSSLAECPPARLLKHVIRCYLRLT
DNDRAREALKQCLPDALKDATFHAALQDEPLTKKWLLQLLQAVAPSEVHNAAAVQS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcgttcctccggcgacaggcggcagcctggcctctggcgaagcgcgaagtttg
ccgagtccatccagctcttcgttttcttcgtccttcgcttcttcggcctcagcttcagag
cctgctgctgcttcgagcgccgcgagtgcgtctggccagcagggcgctgccgctgcgcag
accaccggaggccagtcttcactgtcggcctccgtcgcctcttcgcttcccgacaaagat
catgtttgccagcttctcctcgacctctgcgtcctggagaaacgcgaagcggctcttgca
gacctctcgaaaagacgcgagcagtaccccgacctcgctcccctgttgtggcacagcttc
ggcaccattgccgcgattctgcaggaaatcatcgccatctatccgtgtctctcgcctccc
accttgactgctgcggcctcgaaccgcgtctgcaactccctcgcgcttctgcagtgtgtc
gcgtctcatccagatacgcgacaggcgtttctcaacgcgcacattccgctgttcctctac
ccgtttctgaatactgtctccaagacccggcctctcgagtatcttcggctgacatcgctc
ggggtcgtcggagctttggttaagatcgacgacgcagaagttatcaactttcttctccag
actgaaatcattccgctgtgtctgcgaatcatggagacaggctcggagctctccaaaacg
gtcgcgacgttcatcgtccaaaaggttttgctcgacgacgtcggtctgtcgtacatttgc
gcgacggcggagcggttctacgccgtcagcactgtgctgtgcaacatggtctcttcgctc
gcagagtgcccgcctgcccgactgttgaaacacgtcattcgctgctacctcagattgacc
gacaacgaccgggcgcgggaagctctcaaacaatgcttgccagacgctctcaaagacgcg
acgtttcacgcagcgttgcaagacgagcctctgacgaaaaaatggctgctccagcttctc
caggcagttgccccgagcgaggtccacaacgccgcagctgtgcagtcttga
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integrated database retrieval system
