Toxoplasma gondii: TGME49_261220
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Entry
TGME49_261220 CDS
T01093
Symbol
SPT4
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
tgo
Toxoplasma gondii
Pathway
tgo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TGME49_261220 (SPT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgo03021
]
TGME49_261220 (SPT4)
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_261220 (SPT4)
Transcription machinery [BR:
tgo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TGME49_261220 (SPT4)
RNA polymerase I system
TGME49_261220 (SPT4)
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TGME49_261220 (SPT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
TackOD1
Motif
Other DBs
NCBI-GeneID:
7897257
NCBI-ProteinID:
XP_002365265
UniProt:
A0A125YJM8
LinkDB
All DBs
Position
VIIb:complement(join(1826819..1826916,1827671..1827818,1828168..1828362))
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AA seq
146 aa
AA seq
DB search
MEGGSGSLYDVDDTAASLAGDPSTVATVPRGLVRKVKNKSGQEEDKVVLRLRACISCRLI
MSEQQFYDEGCPNCGFLQMDGDRHRVWDCTTVNFAGFVAVMKPMSSWVARHNKLTEVVPG
CYAVSVVGELPESVKDDVHRASHYAD
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaagcggctctttgtacgacgtcgacgacactgcagcgtctctggcgggg
gacccttcgactgtcgcgacagtgcctcggggactggtcaggaaagtgaagaacaaaagc
ggccaggaagaagacaaagtcgttttgaggcttcgcgcctgcatttcttgtcgcctcatt
atgagcgagcaacagttctacgacgaaggttgtccgaactgcggcttcctccagatggac
ggagatcggcatcgcgtctgggactgcacgactgtcaacttcgctggctttgtcgcggtc
atgaagccgatgtcctcttgggttgcgcgtcacaataaactgactgaagttgtgccgggc
tgctacgcggtgtctgtcgttggagaactgcctgaatctgtgaaggacgatgttcaccga
gcgtctcactatgcagactga
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integrated database retrieval system
