Toxoplasma gondii: TGME49_275750
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Entry
TGME49_275750 CDS
T01093
Name
(RefSeq) small nuclear ribonucleoprotein E, putative
KO
K11097
small nuclear ribonucleoprotein E
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_275750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_275750
03041 Spliceosome [BR:
tgo03041
]
TGME49_275750
03032 DNA replication proteins [BR:
tgo03032
]
TGME49_275750
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TGME49_275750
Spliceosome [BR:
tgo03041
]
Complex A
U1 snRNP components
Sm proteins
TGME49_275750
U2 snRNP components
TGME49_275750
Complex B
U1 snRNP components
TGME49_275750
U4/U6.U5 tri-snRNP components
TGME49_275750
Complex C
U2 snRNP components
TGME49_275750
DNA replication proteins [BR:
tgo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TGME49_275750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
7893722
NCBI-ProteinID:
XP_002371602
UniProt:
A0A125YK48
LinkDB
All DBs
Position
III:complement(join(249875..250003,250908..250997,251874..251930))
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AA seq
91 aa
AA seq
DB search
MSGGVMSNKKLQKIMTQPINLIFRFFTQRMRVQIWLYEQPDMRIEGRIMGFDEYMNMVLD
DAEEVYLKKRTRIPVGRILLKGENVTLIMAT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcgtcatgtccaacaagaaactccaaaaaattatgacccagccgattaac
ctgattttcaggtttttcacgcaacgcatgcgggtccaaatttggctgtacgaacagccg
gacatgagaattgaagggcgcatcatgggcttcgacgaatatatgaacatggttctggac
gacgcagaggaagtttacttgaagaagagaactcgcattcctgtcggccgcattctgcta
aagggcgagaacgtgactctgatcatggcgacctaa
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