Toxoplasma gondii: TGME49_285230
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Entry
TGME49_285230 CDS
T01093
Name
(RefSeq) PRP38 family protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_285230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_285230
Spliceosome [BR:
tgo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TGME49_285230
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
7896190
NCBI-ProteinID:
XP_002369181
UniProt:
A0A125YPV9
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All DBs
Position
V:complement(join(2502107..2502203,2502834..2502995,2503718..2503824,2504532..2504679,2505276..2505593,2506828..2507017,2507602..2507683,2507968..2508054,2508674..2508858,2510024..2510152,2510696..2510783,2511088..2511242,2511875..2511971))
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AA seq
614 aa
AA seq
DB search
MYPYAAPYGSSSLLPAPSGQPAGIPPVTPAVPGGVVSNAPRFYGAPAAPPAALPHRLGVS
AGTPAVVAAPGPPATTAVGAVDAEEDSGDTWAVNRCHLHTKPQLHCKFCRKYKSFAQQLG
ILQKRELKQQEDDDGMKRNMVEMTDSTTYNVNALLRSNILSSEYFKSLHELKTVPEVVDE
ITQYAQHAEPYCSGSSRAPSTLFCCLYKLFTMKLTTKQLEQLLDYSDSPYVRCTGFLYLR
YVHPPEKLWKWYEQYFLDDEVFAASSDTKRTTTMGEYVESLIMEDKYFNTVLPRLPVKVK
NLYGTQLMAMDEHRRRKAKNTADIDRFVAGASVLACSKGDWLEGEIISVDLESRPAGVWV
LVEDGNEELIDLGLVILLRKEKKEKKRKKDGREERPGESEGDRRRRTRSASASRERQRKQ
DRKASPHRRHGNTRSERGERHKRRSRSRSGCRSDSRSASSSRSRGTSPHAKTQHDLLKEF
RRKEREKALATGKDYARRPTSYKSSLSSRLNNPSQSSRSHRGSSRKTDRSPSHGRSGNKQ
PKQGSDRDSRSAPVSSSLNEPSSTTPKEPSHEHLKKMQQLMERYSRSSAEATSDNPRTQD
GELPTVMRLGGGGR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgtacgccgctccttatggctcctcctctcttctccctgcgccgtctgggcag
cctgccggcatccctcccgtgactccagcggtacccggaggagtcgtttctaacgctccc
agattctacggcgctccagcggcgccgcctgcggctctgccgcaccgccttggtgtctcc
gcgggaacaccggcggtcgtcgcggcgcctggacccccagcgacgaccgccgtgggcgcc
gtcgacgcggaggaagacagcggcgacacctgggcagtcaacaggtgccacctgcacacg
aagcctcaacttcactgcaagttctgtcgaaaatataaaagttttgcgcagcaactggga
attcttcagaagcgcgagctgaagcagcaagaagatgacgacggcatgaaacggaatatg
gtggagatgacggacagcaccacctacaacgtcaacgctctcctcagatcaaacatcttg
tcctccgagtatttcaagtctctccacgaactcaaaactgttcccgaagttgtcgacgag
atcacgcagtacgcacaacatgcggagccctactgctctggctcttctcgcgcgccgtcg
actctcttctgctgtctctacaagcttttcacgatgaagctaacaactaaacagctggag
caactgctggactattcggactctccctacgtccgctgtacaggcttcctctatttgcgc
tatgtccatcctccggagaagctgtggaagtggtacgaacaatacttccttgacgatgaa
gtatttgctgccagttcagacacgaagaggacgacgacgatgggcgagtacgtcgagtcg
ctgatcatggaagacaagtacttcaacacggtgcttcctcgccttcctgtgaaagtgaag
aatttgtacggaacgcagttaatggcgatggatgagcacagaagaagaaaagcgaaaaac
acggcagacatcgaccgcttcgtcgcaggcgcctctgttctcgcctgctccaaaggggac
tggttggaaggagaaatcatatcggtcgatctggagagtcgccccgcgggagtgtgggtg
ctcgtcgaggacgggaacgaggagttaattgatctcggcttggtcattctgctccggaag
gagaagaaggagaagaagcgcaagaaagatggacgcgaagagcgccccggggaaagcgag
ggcgaccggcgccgaagaacgaggtccgccagcgcaagtcgggagagacaacgcaaacaa
gacagaaaagcgtctccgcacaggagacacggaaacactcggtctgagcgaggagagaga
cacaagagaagaagtcgaagcagaagtggctgccgcagcgacagtcggagcgcgagcagc
agccggagtcggggcaccagtccgcatgcaaagactcagcacgaccttctgaaggaattc
agaagaaaagaaagagaaaaagcgctggcaactggaaaggactacgcgagaagacctact
tcgtacaagtcgtctttgtcgtcgcggctgaacaatccctctcagtcttcacgctcgcat
cgcggatcctcgaggaaaacagacagatctccttcacatgggcgaagcgggaacaagcag
cccaagcaaggaagtgaccgcgactccagaagtgcgcctgtttcttcgtctttgaacgaa
ccttcgagtaccactccgaaagaaccctctcacgaacacttaaagaaaatgcaacagctg
atggagaggtacagccgaagcagtgccgaggcgacaagtgacaacccgcgaacgcaggac
ggggaacttccgacagtcatgcgacttggaggaggcgggcgttga
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integrated database retrieval system
