Toxoplasma gondii: TGME49_291330
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Entry
TGME49_291330 CDS
T01093
Name
(RefSeq) RNA recognition motif-containing protein
KO
K12881
THO complex subunit 4
Organism
tgo
Toxoplasma gondii
Pathway
tgo03013
Nucleocytoplasmic transport
tgo03015
mRNA surveillance pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_291330
09122 Translation
03013 Nucleocytoplasmic transport
TGME49_291330
03015 mRNA surveillance pathway
TGME49_291330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_291330
03041 Spliceosome [BR:
tgo03041
]
TGME49_291330
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TGME49_291330
TREX complex
TGME49_291330
Spliceosome [BR:
tgo03041
]
Complex C
Other components
EJC/TREX
TGME49_291330
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TGME49_291330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
7896516
NCBI-ProteinID:
XP_002368507
UniProt:
A0A125YM76
LinkDB
All DBs
Position
IX:join(4246860..4246890,4247852..4247937,4248356..4248712,4249218..4249430)
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AA seq
228 aa
AA seq
DB search
MTQSMLDMSLDDIVAAHREAAGNSSGRGSRGRGGGFGSRRGSLRGPPGGNSGFLSRGRGR
GFSSWTSQDHWEGRSHAFFPRRSAASPFFSDRGEGRVGPARRGGRDGFARERPREPTAVV
RVSNLDYSVLEEDLKELFAAVGEVVKVWIDYDRTDRSKGTGGCIFRSVFDAKRAIEVYEG
RRLEGLPLRLELQPPRQEYRRSPFGPYSQDFSRRDRGPWRGVQDVELW
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtccatgctggacatgagcctagacgacatcgtcgctgctcatcgcgaggca
gcaggcaactcgtcaggccgaggcagccgcggccgcggaggcggctttggcagtcgacgc
ggatctctgcgagggccccccggaggaaattcaggatttctgtctcgcggcagaggtcgg
gggttctcgtcttggacgagccaagaccactgggaaggtcgatcgcatgcgttcttccct
cggcgctctgcggcctcccccttcttctccgacagaggcgagggccgcgtaggtcctgcc
cgacgcggaggcagagacggttttgcgagggagaggcctcgagagccgacggccgtggtg
cgagtgagcaatctggactacagcgttctcgaagaagatttgaaggaactcttcgccgcc
gtcggcgaagtcgtcaaggtctggatcgactacgaccgcaccgacagatcgaagggcact
ggaggctgcatttttcggagcgtcttcgacgccaagcgagcgatcgaggtgtacgaaggt
cggaggctggaaggcttgcctctgcggctggagttgcagccgccgcgtcaggagtatcga
cgttccccctttggtccttacagccaagacttctcgcgcagagacagaggtccgtggaga
ggcgttcaagacgtcgaactatggtga
DBGET
integrated database retrieval system
