Toxoplasma gondii: TGME49_295010
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Entry
TGME49_295010 CDS
T01093
Name
(RefSeq) DEAD/DEAH box helicase domain-containing protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_295010
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_295010
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
90S particles
Helicases
TGME49_295010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIF_alpha
ResIII
AAA_22
Nop14
Motif
Other DBs
NCBI-GeneID:
7894089
NCBI-ProteinID:
XP_002370270
UniProt:
A0A125YSZ7
LinkDB
All DBs
Position
Ia:complement(join(1312322..1312585,1312930..1313742,1314204..1315223))
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AA seq
698 aa
AA seq
DB search
MEGSALHKLRRAGPPPSRRMQTSKGTDQAKGKLLASHEAAKAKRNATKGGAKTVAAFKRS
MHCTGVKGKNVLSHKSKLSRKSPSRGKALLHGVSESDDEDEEEEDEDEEDEEEEDREAGD
EEDFEAEEEEEDGEEGEESNKVSEEEDRAEEDQDAGEEDSDSEEDADDQQVTDEAARTMK
GRRNNSSYSCTPSRRKRAGDESGAIPGSLAMSPSVEKRRRAGDAAVADDSSFSQPRENEE
EPAAAGSPWLGVENAPTFASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLA
PTGSGKTLGYCWPLLQRIGRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLL
GGRDLVEEGKLLDQCPHIVIATPGRMSDHVQNDPLRMKKRLSLVDVLVLDEADRLLSDEF
EDDLKTILSCVPTSSQGRQTLLFSATVSPALLALQRRFGDDAMPLVDAHPTDQPALPNLS
HFYMFVPTRMQPIYLLYLLEHTSPFCSDRGIVFAGSVRQTQQICTALEILKQSATPLHSL
MEQRKRVACLEKFRSETSRLLICTDVAGRGLDLPRVEFVINMQVPGKAQDYVHRTGRTAR
AGRKGVALTFVDPKSVRAVHRIEALINTQLQPLPSINEQDVLKFLSNYSKVVQKSLLFLN
EIGFDEKAEQHEEYTKAFKEARRKRRAQKAEIANVVHV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagcgctctgcacaagctgcgtcgagcgggaccgcccccgtcgcgccgcatg
cagacatccaaaggtacagaccaagcaaagggaaagctcttggcttcgcatgaagcggca
aaagccaagagaaacgccacaaaaggcggcgccaagacagtcgcagccttcaaacgctca
atgcattgcactggtgtgaagggaaagaatgtcttgtcccacaagtcaaaacttagccga
aagtctccctctcgaggcaaggcgctgctgcacggtgtgagtgagagcgacgacgaggac
gaagaggaagaagacgaagatgaggaagacgaagaggaagaagacagagaagcgggagac
gaggaggactttgaagcagaggaggaagaggaagacggggaagaaggcgaagaaagtaac
aaagttagtgaagaggaggatcgtgccgaggaggaccaagacgcaggagaggaagacagt
gattctgaagaggatgcagatgaccaacaggtcacagatgaagctgcgcgtacaatgaag
ggaaggcgaaacaattcttcatattcgtgtactccttctcgcaggaagagagcaggagac
gaaagtggagccattccgggaagcctggcaatgtctccttccgtggagaaacgaaggagg
gcgggggatgcagctgtcgctgacgactcttctttttctcagccgagagagaatgaggaa
gagccagctgcggcaggctctccctggttaggggtcgagaacgcgccgacattcgcctct
ctgggtgtgccgccagctttgattcgaacagcggcttctcttcacattttccatccgtcg
ccgattcaagtcctttctctgccgcatactctgcgcgggaagaacgtttgcggcctcgca
ccgacggggagcggcaagacactcggctactgctggcctctccttcagagaatcgggcga
ggcgacggtcacgctttcatgggtctcgtcttgctgcctgcgcgagaactcgcgattcaa
gtcctcgatcagttccgaatctacggagtccagctgggggtgcgtgtatgtctgcttctg
ggcgggcgggacctcgtggaggaaggcaagctgctagaccagtgcccgcacattgtgatc
gcgaccccggggcggatgtcggaccacgtgcagaacgatccgttgcggatgaaaaagcgg
ctttctctagtggacgttttggtcctggacgaggcggaccgccttctctccgacgaattc
gaagacgacttgaaaaccattctttcttgtgtgcccacttcctctcaaggccgccagacc
ttgctgttttctgccaccgtcagcccggcgttgctggcgctacagcgacggttcggggac
gacgcgatgccgctggtcgatgctcatccgacagaccagcccgcgctgccgaatctatcc
catttctacatgtttgttcccacgcgcatgcagccgatctatttgctgtatcttctggag
cacacctcgccgttctgctcggacaggggcatcgtgttcgcggggtctgtgcgccagact
cagcagatctgcaccgccctagagattttgaagcagtcagccacgccgcttcactcgctc
atggagcagcgcaagcgcgtcgcgtgtttggagaaattccgcagcgaaacctcaaggctg
cttatctgcacggacgtcgccggcaggggtcttgacctcccgcgagtcgagttcgtcatc
aacatgcaagtcccaggaaaggcgcaggattatgttcaccggactgggcgtacagcccga
gcaggccggaagggggtcgctctgacattcgtggatcccaagtctgtcagggctgttcac
cggatcgaggcactgatcaatacccagttgcagcctttgccgtcgataaacgaacaggac
gttttgaagttcttgagcaattacagcaaggttgtgcagaaatcgcttctgtttttgaat
gaaataggtttcgacgagaaggccgaacaacatgaagaatacacaaaagctttcaaggaa
gcgcgaaggaaacgccgtgcccagaaagcagaaatcgccaatgtcgtccatgtttga
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integrated database retrieval system
