Toxoplasma gondii: TGME49_306290
Help
Entry
TGME49_306290 CDS
T01093
Symbol
POLR3A, RPC1
Name
(RefSeq) DNA-directed RNA polymerase III RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TGME49_306290 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgo03021
]
TGME49_306290 (POLR3A)
Enzymes [BR:
tgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TGME49_306290 (POLR3A)
Transcription machinery [BR:
tgo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TGME49_306290 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SR-25
Motif
Other DBs
NCBI-GeneID:
7901342
NCBI-ProteinID:
XP_002370391
UniProt:
A0A125YX49
LinkDB
All DBs
Position
IX:complement(join(5910034..5910100,5910527..5910742,5911011..5911132,5911743..5911942,5912637..5912781,5913624..5913898,5914824..5915619,5916215..5916778,5917184..5917843,5918204..5919930,5920740..5921208))
Genome browser
AA seq
1746 aa
AA seq
DB search
MATGDGDKDRRSDSGDEGETEKEGGLRASQRMPARPTEPGESFLDVTMTDYSSSSSSSSS
SSSSASSSSSSSSSSSSSSSLTAAHLMQNAQLRSSFLRKEMVEEKSGALMTVDAVQFDVL
SGEEISRYSEVEIHNREIYVNMTNTPHPYGVLDLRLGPNKSDSRCQTCGHTLLQCTGHWG
YMDLQAPVYHVGYFKYVLQILYCICKTCAALLQPPEQKEKLLLRIRRHQSDPIVKRLLFK
RTVEACKKVSKCFECGAPQGVLKRVVKPSLDQFMKIRHVVKSKEGRAMTVEDDLDPLYVK
NLLERIRPSECEILDIVSPEKLLLSRLLVPPSCIRPSVTIGEQGTTEDDLTCVLSDIAEL
NNVLQSHVKAGFHTNQFLGIWEFLQLQCTRLINADAPAVSQLLASKNISKPGRGICQRLK
GKEGRFRGNLSGKRVDFSGRTVISPDPNANVYEVVVPEWVAKRLTFPERVNRVNIEVLRA
AVLKGCSDWPGACYVNKVDGSKCSLRYANRRQVAENLQIGDVVERHLCNGDVVLFNRQPS
LHRMSIMAHRARVMPWRTFRFNECVCSPYNADFDGDEMNLHLPQTHEARAEALYLMGVVN
NLVTPKNGEPLIAATQDFLSSSYMLTHKDVFLTRDQFCLICSYFTDGLSRVDLPPPTILK
PVELWTGKQVISVLLRPNRNSFVMVNFQLKEREFSAARIPPGEAPFMCPSDAYVIFRHSE
LVAGCIGKKVLGDAKFGLFFHLIRDNSPAQAAACMGRIAKLSARWFANRGMTIGIDDVTP
SPTLLAAKKDILNHGYNLVAQEIQMYKKGALQPHPGCTLEQTLEVRVKSILDDLRNEAGK
ACNRVLHPLNKPLIMFNSGAKGALINIAQMIACVGQQNVSGQRIQNGFVSRTLPHFPLNC
RDAKSRGFVASSFYSGLQPDEFFFHTMSGREGLVDTAVKTAETGYMQRRLMKALEDLSIR
YDNSVRTSDGQIVQFVYGDDGLNPAMMEDKNQSMCLDKVFQHISSLLHIKPLHVLPPSSP
LCAPASSPAAPNWPEVARDKILPPDSDEVLTALLQRYQQMDIRLVEASQRQASGNVEPPR
AVYEIFSRLGASDGGHGKEKRAREDWAKLMKLPRSYRQKLAILLQTAASGNASTSRFCQQ
VRGNLLAHVAVYEWLPIREQHVPLLPFEILKWSAFLLTRTAEVVPLPLCEHQQVALEEAP
THQSGTERVRLFQDELWAWLERKAADVAEYRESDREKPGLTQDSYDSLLACWRRQGFGIE
RRQWIVPDCETALQARGVKTKSEAEDPSAAGDEETDMVSRDTWQTPDMSRSFPEFEGHEK
GLAPTPGCPGSSSGCRNGDLGLPERKWKFSKHQWVTVRHILEFLRCSWRKYVKAISEAGE
AVGAMGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAQKIQTPIIVVPLVN
DEDYNYAVMVKNRIEKTLLSECCSYIKEVYAPDGAWLVVKLDQHTIRKLFLDINANTVKD
AILRQTAVNKVRITKNSVEIINEWKVRVMPPGGNQIFFQLQALKLGLLNIVLCGHKDVKR
GVIKCEQVEQPDKTKKTVYGLAVEGYGLRDVMGTQGVKALQATSNHVMEVAQILGIEAAR
AVIISEIRKCMDAYSMDIDCRHMTLLGDVMTFRGEVLGINRFGIQKMRASTLMLASFEET
NEHLFEAAVHHRADPVKGVSECIIMGKQVSLGTGSFDLLLSQSGAPLASDYGGVLSAYGL
PEKHTV
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggcgacggtgataaggatcggagaagtgactccggagatgaaggagagaca
gaaaaagaaggcggcttacgagcgtcacagagaatgcctgcccggcccacagaaccaggt
gaaagtttcctagatgtaaccatgactgactattcttcttcttcctcttcttcctcttcc
tcttcttcctctgcctcttcttcctcttcctcttcttcttcctcttcttcctcttcgtcc
ttgacagcggcgcatctcatgcagaacgcccagttgcgaagcagcttcttgcgtaaggag
atggttgaggagaagagcggtgctctcatgactgtcgatgcagtccagttcgatgtcctc
tctggagaggaaataagcagatacagtgaagttgagattcacaacagagaaatctacgtc
aacatgaccaacacccctcatccatacggtgtgctcgatctgcgcctaggcccaaataaa
agcgacagtcgttgccagacctgtggtcacaccctgctgcagtgcacgggacactggggc
tacatggacttgcaggctccggtctaccatgtggggtacttcaagtatgtgttgcagatc
ttgtactgcatctgcaagacttgcgcggcgttgctccagccgcctgagcagaaggagaag
ctgcttctgcgcattcgccggcaccagtcggacccgatcgtcaagcggctgctcttcaag
cggactgtggaggcttgcaagaaggtgtccaagtgcttcgagtgtggagcgccgcagggc
gtcttgaagcgagtggtgaagccgagtctcgatcagttcatgaagattcggcatgtagtg
aagtcgaaggaggggcgggccatgacggtcgaggacgacctggatccgttgtacgtgaag
aatttgttggagcgcattcggcccagcgagtgcgagattctggacattgtgtctccggag
aagctgcttctgtccaggctcttggttccgccgagttgcatccgaccgtcggtgacgatc
ggcgagcagggaacgaccgaggacgacttgacttgtgtcttgtccgacatcgccgagctg
aacaacgtgctgcagagtcacgtcaaggcagggttccacacgaaccagttcctcggaatt
tgggagtttctccagctccagtgcacgcgcctgatcaacgcagacgcaccggcggtctcg
cagctcctggcgtcgaagaacatcagcaagccgggacgcgggatttgccagcggctcaag
ggcaaggagggtcgctttcgcgggaacctgtcggggaaacgtgtggacttttcaggacgc
acagtcatttctccagacccgaacgcaaatgtttacgaggttgtcgtgcctgagtgggtg
gcgaaacgtctgacgtttccagagcgcgtgaaccgagtcaacatcgaagtccttcgcgct
gcggtcttgaaggggtgctcggactggcctggcgcctgctacgtcaacaaggtcgacggc
agcaagtgcagtctgcgctacgcgaaccgccggcaggtggcagaaaatctgcagatcggc
gacgtcgttgagcgtcacctgtgcaacggcgacgtcgttctcttcaaccggcagccctcc
ctgcacagaatgagcatcatggcgcaccgcgcgcgcgtgatgccttggcgcacgttcagg
ttcaacgaatgtgtctgctcaccctacaatgcggactttgatggcgacgaaatgaatctg
catctgccgcagacgcatgaggcccgcgcagaggccctctacctcatgggcgtcgtcaac
aacctcgtgacacccaagaacggagagccgctgatcgcagcgacccaggacttcctctcc
tcctcgtacatgctcacccacaaagacgtcttcctcacacgcgaccagttctgcctcatc
tgctcgtacttcaccgacggcctgagccgagtcgacttgccgcccccaaccatcctcaaa
ccggtcgaactatggaccggcaaacaggtcatcagcgtcctgctccggcccaatcgcaac
agcttcgtcatggtcaacttccaactgaaggaacgtgaattctccgcagccagaatcccc
cctggagaggcgcccttcatgtgtcctagcgacgcctacgtcatattccgccattctgaa
ctcgtcgcgggatgcatcgggaaaaaagttctcggggatgcaaagttcggactctttttc
catttgattcgtgataactcccccgctcaagcagctgcgtgcatggggcgaatagccaaa
ctgtctgcgcggtggttcgcgaaccgtggaatgaccatcgggatcgacgatgtcaccccg
agtccgacgcttctagctgcgaagaaagacattctgaaccacggctacaacctcgtggct
caagagattcaaatgtacaagaagggcgccctccaaccccacccgggatgtacactggag
cagactctcgaggtccgcgtcaagtcgattttggatgacctgcgaaatgaagctggcaag
gcatgcaaccgcgtcctccatccgctaaacaaacctctgatcatgttcaattcaggcgcg
aaaggtgcactcatcaacatcgcgcagatgattgcgtgtgtggggcagcagaacgtgagc
ggccagagaatccagaacggctttgtgtcgcgaacgctccctcacttcccgctcaactgc
agagatgcaaagtcgcgcggcttcgtcgccagctcgttctactctggactgcaaccggac
gaattcttcttccacaccatgtccggtcgcgagggtctcgttgatactgccgtcaagact
gcggaaacggggtacatgcagaggcgattgatgaaggctctggaagacctctcgattcgc
tacgacaactcggttcgaacaagcgacgggcagattgtccaattcgtctacggagatgac
ggcctaaacccagcgatgatggaagataaaaatcagtccatgtgtctcgacaaagtcttt
caacacatctcgtctcttctgcacatcaaacctctccacgttctccccccctcgtctccc
ttgtgtgcgcctgcctcttctcccgccgctccgaattggccggaagttgcgcgcgacaaa
atccttcccccagacagcgatgaggtcctcactgcacttcttcagagatatcagcagatg
gatattcgacttgtggaagcctcgcagcggcaggccagcggcaacgtggaaccgcccaga
gccgtctacgagatattctcccgcctcggcgcttccgacggtggccacgggaaagagaag
agagcccgcgaggactgggccaagctcatgaagctgccgaggtcctacagacaaaagctc
gcgatcctcttgcagactgccgccagtggaaatgcttcgaccagtcggttctgtcagcag
gttcgcgggaatcttctggcgcacgtcgcagtgtacgagtggttgccgattcgcgagcaa
cacgtaccgcttctgccgtttgaaattctaaagtggagtgcgttcctcttgacgcgaaca
gctgaggttgtgcccctgcctttgtgtgagcaccaacaagttgctctcgaggaagcaccg
acccaccagagcgggacggagcgcgtgcgtcttttccaggacgagttgtgggcgtggctg
gaacggaaagccgcagatgttgcagagtatcgcgaaagcgaccgcgagaaacctgggctg
acgcaagacagctacgacagtctgcttgcctgctggagacgtcagggcttcggcatcgaa
cgaaggcagtggatagtgcccgactgcgaaactgctcttcaggcgagaggtgtgaagact
aagagcgaggcggaagatccgtccgccgcgggcgacgaagagaccgacatggtctctcga
gacacttggcagactccagatatgtcgcgttcctttccagaattcgaaggtcacgagaag
ggtcttgccccgacgccaggctgccctggatcgagcagtgggtgtcgaaacggcgacctt
ggtctccccgaaagaaaatggaaattcagcaaacaccaatgggtcacagtaagacacatt
ctcgaattcctgagatgcagctggcggaaatacgtcaaggccatcagcgaagctggagag
gctgtcggagccatgggtgcccagtcgattggcgaaccaggcacgcagatgacgctcaag
acgttccactttgcaggtgtggcctccatgaacgtgacgcttggggttccccgtatcaag
gaaatcataaacgcagcgcaaaagattcagacccccatcatcgtcgtgcctctggttaac
gacgaggactacaactatgcagtgatggtgaaaaatcgaattgagaagacgctgttgtcg
gagtgctgctcatacatcaaagaggtctatgcgcccgacggagcttggctggtcgtcaag
ctcgatcagcacacaattcggaaactcttcctcgacatcaatgcaaacacggtcaaagat
gccattctcaggcagacggctgtcaacaaagttcgcataacgaagaactccgtggagatt
atcaacgagtggaaagtgcgcgtaatgcctcctggaggaaatcagatcttctttcaactt
caagcgctcaaactcggccttttaaacattgtactgtgtggccacaaggacgtcaagaga
ggcgtgatcaagtgcgagcaagttgaacagcccgacaaaaccaagaaaacagtgtacggc
ctcgctgtcgaaggctatggacttcgagatgtcatgggcactcagggtgttaaggctctt
caggccacctcgaatcacgtgatggaagttgctcagattcttggcatcgaagcagcgcga
gctgtcattatcagcgaaatccgaaagtgtatggacgcgtactcgatggatatcgactgt
cgacacatgacgcttctcggtgacgtaatgacgttcaggggggaagtccttggcatcaac
cgcttcggcattcaaaaaatgcgagcatccacccttatgctggcatccttcgaagagaca
aacgagcacctgttcgaggctgccgtccaccaccgggctgacccagtcaaaggtgtcagc
gaatgtatcatcatgggaaagcaggtgtctcttggaaccggaagtttcgatctgctgctt
tcgcaatcgggagcgcccttagccagcgactacggtggagtgctatcggcgtacgggttg
cccgagaagcatactgtgtag
DBGET
integrated database retrieval system
