Toxoplasma gondii: TGME49_312530
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Entry
TGME49_312530 CDS
T01093
Name
(RefSeq) splicing factor, CC1 family protein
KO
K13091
RNA-binding protein 23/39
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_312530
Spliceosome [BR:
tgo03041
]
Common components
Common spliceosomal components
General mRNP proteins
TGME49_312530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
RRM_5
RRM_occluded
RBM39linker
Motif
Other DBs
NCBI-GeneID:
7896040
NCBI-ProteinID:
XP_002364475
UniProt:
A0A125YMG0
LinkDB
All DBs
Position
XI:join(2765290..2766843,2767106..2767453)
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AA seq
633 aa
AA seq
DB search
MGDLDFDEVEKLLDSRDVGRDKEGSTHRENEEKPVNNERNERAGPSKATIGPPSRRGGAR
GGDDRGSPSRSPGPNKIRGRSGRGEDGRGPRGGSGTKREGLSKREKEGAYHREWPSGSGY
GRRDDHDDRWRGRRGDDRHKGPSRSMRSRSRDRRRGSRSPHYGRESRGGPGGRGPSPGTL
RDEAVYIRMRRERDEQQKKQREDELKKREVEEARRDDLTVLVLNLCLKAEEKHIYEFFSA
NAGKIRDIQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNR
AARAAKQQQQGGAAAESAVVSIPMRVYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPK
DANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQLRVGYAADGVRGSATEGTLQQAA
AAAALQQQQHQLVPPPQVSQEAVLAQQLAAQAAAAKQGAQPLGAVDETKDLQEKDEDDGL
DDDDGDKGLIHGRDHKQALMQKLLNRDAGSSTSSAATQSGFLPASNGALFADNATGSCNV
VLHNMFAAKDVNLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVDGNVWIRFAHPDQ
ARAAFGALNGRYFAGKPISAEFISDAVWSSTCS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacctcgattttgacgaggtagagaagctcctggacagtcgggacgtggggcgg
gacaaagaggggagcacgcaccgagagaacgaggagaagcctgtgaacaacgaacggaac
gagagagcaggcccctccaaagccaccataggtccgccgtctcgacggggcggtgctcga
ggtggggacgaccgaggctcgccttctcgttctccaggccccaacaaaatcagggggagg
agtggacgcggagaagacggacggggaccaagaggaggcagtggcacaaagagggagggt
ttaagcaagagagaaaaagaaggagcctaccacagggagtggcccagcgggtcggggtac
ggcaggagggatgaccatgatgacagatggagaggacggcgtggagacgaccggcataaa
ggcccttcgcgatccatgcgcagcaggagcagggacagaaggcggggttcccgaagcccg
cactacggccgcgaaagccgggggggacccggcggccggggaccaagtcctggcactctt
cgggacgaggcagtgtacattaggatgcggcgagaaagagatgaacagcagaagaaacag
cgcgaggacgaactgaagaagcgtgaagtcgaggaggctcgccgtgacgacctcactgtc
ctcgtcctgaatctgtgcttaaaagcagaagagaaacatatttacgagttcttctccgcg
aatgcgggaaagattcgggacatccagttgattcgggaccaacggtcgggcacttccaaa
ggtgttgcatatgtcgaattctatactcaagagagtgtgatcaaagcgatggctttgaac
ggcatcgcgttcaagggacagccgcttcgagtgcaggcatcgatggctgagaagaaccgc
gccgcccgcgcagcgaaacagcagcaacaaggtggggcggcggccgagtcggcggtagtg
agcattccaatgagagtgtatgtgggcggactggttgacaaccttgcgaagattcaagag
gaagatcttcgagtgctcttcgggccttttggacgcatcaacgaagtcgagatcccgaag
gacgcaaacacagggggactccgggggtacggtttcgtgacctacgcgtctgctgctgac
gcccacgaagccatgcagcacatgaacaactttgagttgcttggccaacaactcagagtt
ggctacgctgctgatggtgttcgcggtagcgccaccgagggtacgctccagcaggcggca
gcagcggctgcacttcagcagcagcaacatcagctggtacctccccctcaggtttcccaa
gaagctgtccttgcgcagcagctggcagcccaagctgcggctgcgaaacagggtgcacag
cctcttggagccgtcgacgagaccaaagatctccaagagaaggacgaagacgatggtctg
gacgacgatgatggagataagggcttgattcatgggagagaccacaaacaggcgctgatg
caaaagctgctcaaccgagacgctggctcgtctaccagctccgcagcaactcagagtggc
ttcctccccgcgagcaacggagcattgtttgccgacaacgcgacaggcagttgtaacgtc
gttctgcacaatatgtttgctgccaaagacgtgaatttgaaggaagacccacatttcttc
ttagaccttggagacgatgttcgcgatgagtgcaagaaattcggctcggtagagaaggta
tggatcgacgagcgcaacgtcgacggcaatgtctggatccggttcgcccacccggatcaa
gcccgagctgcttttggtgccctcaacggacgatactttgccggaaagccgattagtgca
gagttcattagtgatgcagtgtggtcaagcacctgttcatga
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