Toxoplasma gondii: TGME49_312990
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Entry
TGME49_312990 CDS
T01093
Name
(RefSeq) DEAD/DEAH box ATP-dependent RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_312990
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_312990
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_312990
Spliceosome [BR:
tgo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TGME49_312990
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
90S particles
Helicases
TGME49_312990
Pre-60S particles
TGME49_312990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
7896070
NCBI-ProteinID:
XP_002364511
UniProt:
A0A125YGG5
LinkDB
All DBs
Position
XI:complement(join(3021368..3021408,3021620..3021815,3022096..3022380,3022905..3022958,3023385..3023642,3023913..3024110,3024434..3024717,3025384..3025548,3026126..3026354))
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AA seq
569 aa
AA seq
DB search
MKKNSKRSLAASANASEVEVKKKKKKIRECDPVNEEPTEDQEQMPSSTEEPESEGPTDDS
GDSAEQQGVQKTDKATGKDSFFSDVTFESLDICDPVKKALAEMKMERLTEIQAKSIPRLL
EGRDVLGAAKTGSGKTLAFLVPAVELLYQVKFLPRNGTGVIVISPTRELSLQIFDVAAEL
AKFLPQTLGLVIGGANRKHEVEKLQKGVNILVATPGRLLDHLQNTKGFQYSNLLSLVIDE
ADRILQIGFEEEMNAILQMLPQTRQTCLFSATQSAKVADLARLSLKKPVFVEVKDTVATV
RGIQQGYVVCPAEERFLLLFTFLKKNREKKIMVFFSSCMSVRFHDELFNYIDLPTTCIHG
KKKQNARMSTYYDFCNAEKGILLCTDVAARGLDIPKVDWIVQYDPPDDPKEYIHRVGRTA
RGAGGTGKALLFLMAEEIGFLRYLKQAGVPLNEYTFPSNKIANVQSQLERLIEKNYYLHK
ASQDAYRSYLHAYASHTLKDIFNVHALDLQRVARAFGFSVPPRVELNLKAKSRTKVDKKT
QRFSGTGHKFSASNPYGKREEGDRRQFSR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacagcaagaggagccttgcggcttctgcaaatgcatcggaggtggaagtg
aagaagaaaaagaagaaaattcgggagtgcgaccctgtcaatgaagaaccaacagaggac
caagagcaaatgccttcgtcaacagaagaaccggaatcggaaggtccaacagatgattct
ggcgacagcgcggagcagcaaggcgtacagaagacagacaaggccactggaaaggattct
ttcttcagcgatgtcacattcgagtccctcgacatttgtgaccctgtcaaaaaggctctc
gccgagatgaagatggaacgcttgacagagatccaagccaagtcgatcccccggcttctg
gagggcagagacgtcttgggagcggctaaaacaggatctggaaaaaccctcgctttcctt
gtcccggccgtcgagctcctgtaccaagttaaatttcttcctcgcaatgggacgggggtg
atcgtcatttcccctaccagagagttgtctttgcagatttttgatgtcgcagcagagctg
gcgaagttcctccctcagaccctcggtctcgtgattgggggcgcaaacaggaagcacgaa
gtcgaaaagctgcagaagggagtgaacattctggtcgccacgcctggacgacttctcgat
caccttcagaacacaaagggctttcagtattccaacctcctctcgctggtgatcgacgag
gcagatcgaatccttcagattggatttgaagaggaaatgaacgccattctccagatgctt
ccccaaacccgccaaacgtgtctcttttccgcaacgcaaagcgcgaaagtggccgacctc
gctagactttcccttaagaaacctgttttcgttgaggtcaaggacaccgtggcgacggtt
cgcggcatccagcagggctatgttgtctgtcccgcagaggaacgttttcttctccttttc
acatttttgaagaagaaccgggagaagaagattatggttttcttcagcagttgcatgtcg
gtccggttccacgatgagctcttcaactacatcgatcttccaacgacgtgcattcacggc
aagaagaaacaaaatgctcggatgtcgacgtactacgacttctgcaatgctgaaaagggc
attcttctctgcacggacgtcgctgcacgtggtctcgatattcccaaggttgactggatc
gtccagtacgacccacctgatgatccaaaggagtacattcaccgtgtggggcgtacagct
cgaggtgcggggggtaccggaaaagccctgctgtttcttatggctgaagagattggcttt
ctgcggtatcttaaacaagcgggagttcccctcaacgaatacactttcccctcaaacaaa
atcgccaatgtccagagtcagctggaacgcttaatcgagaaaaactactaccttcacaaa
gcttcccaagatgcatatcgctcttatcttcatgcgtacgcctctcatactctcaaagac
attttcaacgtccacgccttggaccttcaacgcgtagcacgggcatttggattctcggtt
ccgcccagagtggagctcaacctgaaggcaaagagccgaactaaagttgacaagaagaca
cagcggttttctgggacgggccacaagttctccgcctcgaatccctacggaaaaagagaa
gaaggcgaccgcaggcaattttcgcggtga
DBGET
integrated database retrieval system
