Toxoplasma gondii: TGME49_313010
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Entry
TGME49_313010 CDS
T01093
Symbol
DDX6
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_313010 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_313010 (DDX6)
03036 Chromosome and associated proteins [BR:
tgo03036
]
TGME49_313010 (DDX6)
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_313010 (DDX6)
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
TGME49_313010 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
TGME49_313010 (DDX6)
Chromosome and associated proteins [BR:
tgo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
TGME49_313010 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DUF6610
Motif
Other DBs
NCBI-GeneID:
7895763
NCBI-ProteinID:
XP_018635453
UniProt:
A0A125YUU4
LinkDB
All DBs
Position
XI:complement(join(3032437..3032506,3033015..3033364,3034052..3034542,3034975..3035209,3035547..3035828))
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AA seq
475 aa
AA seq
DB search
MSAAYYTRRPGLSGSPYPQSQNGSGERNANQGQGPAPYGYPPQQRMQHFSQPQNSVPSQP
ANPAHVDPNSNPEGDEGWKSKVVLPPKDNRVKTEDVTKTKGTDFEEYFLRRELLMGIFEK
GFEKPSPIQEASIPIALAGKNILARAKNGTGKTAAFSIPLLEKCQTSKRYIQGLILVPTR
ELALQTSAVVKAIGKHMNVQCMVSTGGTSLRDDIMRLYNPVHVLCGTPGRILDLANKGVA
DLSNCHMVVMDEADKLLSAEFQPIVEELIKFVPRERQILMYSATFPVTVKDFKHKYLPDA
HEINLMDELTLKGVTQYYAFVEERQKVHCLNTLFSKLQINQAIIFCNSVTRVELLAKKIT
ELGYSCFYIHARMMQSHRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVINFDFPKNS
ETYLHRIGRSGRFGHLGLAINLITYDDRFNLYRIESELGTEIQPIPSQIDEAIYT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcctactacacccgcagacccgggctctctggatcgccctatccccagtct
caaaacggaagcggcgagagaaacgcgaaccaggggcaaggcccggcgccctacggctac
ccgcctcagcagcgcatgcaacacttcagtcagcctcaaaacagtgtgccttcccagccg
gccaaccccgcgcacgtcgacccgaacagcaatcctgagggcgacgaaggctggaaaagc
aaagtcgtcctgcctccaaaggacaaccgcgtgaaaaccgaggatgtgacgaagacgaaa
ggcacggactttgaggagtattttctacgacgtgaattgttgatgggcatcttcgagaaa
ggcttcgaaaagccgtcgccaatccaagaagcgtcgattccaattgctctcgccgggaaa
aacatcctcgctcgggcgaaaaacggcactggaaaaaccgccgcgttctcgattcctctc
ctcgaaaagtgtcagacgtcgaagcgttacatccaagggctgattctggttccgacccgt
gagctggcgctgcagacgagcgcagtggtgaaggcgattgggaagcatatgaacgttcag
tgcatggtgtcgacgggaggcacaagcctgcgtgacgatattatgcggctgtacaacccg
gtgcatgtactctgtgggacgccgggaagaattctggacctggcgaacaagggtgtcgca
gacttgagcaactgccatatggtggtcatggacgaagcagacaaactgctctcggcggag
tttcaaccgattgtcgaggaactcatcaagttcgtcccgcgtgagaggcaaattctgatg
tactccgcgaccttcccggtcacggtcaaagacttcaaacacaaatacctgccagatgct
cacgaaatcaacctcatggacgaactcacgctcaagggtgtcacgcagtactacgccttc
gtcgaagaacgccaaaaagttcactgccttaacactctcttctcgaagcttcaaatcaac
caagcaatcattttctgcaacagcgtgactcgtgtggagcttctggcgaagaagatcacg
gaactcggatactcgtgcttctacatccatgcgcggatgatgcagtcccacagaaaccgg
gttttccacgatttccggaacggggcgtgtcgctgcctcgtgtcgtccgacctcttcaca
cgtggaatcgacattcagtccgttaatgtcgttatcaacttcgacttcccaaagaactct
gagacatatctgcaccgcattgggcgctccggtcgcttcggacacctcggacttgccatc
aaccttatcacttatgacgaccgtttcaacctctaccgaattgagagcgaacttggtacc
gaaattcagccgattccgagccagattgacgaagcaatttacacatag
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