Toxoplasma gondii: TGME49_313240
Help
Entry
TGME49_313240 CDS
T01093
Name
(RefSeq) ethylene-responsive RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_313240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_313240
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_313240
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_313240
Spliceosome [BR:
tgo03041
]
Complex A
U1 snRNP components
U1 related factors
TGME49_313240
Complex B
TGME49_313240
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
Pre-60S particles
Helicases
TGME49_313240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
ERCC3_RAD25_C
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
7896039
NCBI-ProteinID:
XP_002364535
UniProt:
S8EUA0
LinkDB
All DBs
Position
XI:join(3209807..3211474,3212003..3212074,3212530..3212622,3213326..3213519,3213945..3214087,3214511..3214584,3215015..3215125)
Genome browser
AA seq
784 aa
AA seq
DB search
MWGLASQARSRSARVAGPGPCRFASRKSESLRTIFPTVFPREGSGAPRGTSRVSASVSRV
APRLPSWHCRPAPAGSPDSYRVAFYQYLSAFPSTRLFSSMPRSETDPQYASGGSSPEHPG
AAGGNGPAYYSDPKSSFASVNPPAYTGQALPPLSSDSCPYPYSPSSYSPDLGPVTSPSDQ
AFPPSYDPSYSQGQPHAYAPLQPPHNAYPPPKHDPSYSVYGGQNATGFGAPTYSPPAPCP
SYGAQAGAPYPPPGGYAPNPGYPGSPAGPWASGPGAGPRRGHAPGYGDQRSRGTEAPWRH
SQLSQDGSRRGRYDAGAMGSHLVEPKWSEEQLAPIEKDFYVEHPSVASRTDEEVAAFLEA
NAMRIDGQEPKPRPVFSFEETGFPTAIQNQLRKMNFAEPTAIQKIGWPTALSGRDMIGIA
QTGSGKTLGFLLPGLVHAAAQPPLAQGQGPIVLVLAPTRELAMQIRHECMRFTEGLSLAS
SEDPQRADTKFRTACVYGGVPRQGQATELRNGAEILIATPGRLIDFLDLGVTNLKRVSYI
VLDEADRMMDMGFEPQVRKIFSQVRPDRQTLLWSATWPKEVRGLASEFCRTRVVKLQVGK
ADLQANANVTQRIEVVSSNQLQHRLLSVLQEEVTGQKTLIFCETKRQCDQLCRELRYRQL
RALAIHGDKEQRERDRILHDFRKGDCEILLATDVASRGLDIQDVKFVINYDVPKNIESYI
HRIGRTGRAGNKGTAISFFQYDFYSPEKVTMARKICEVMRSVGQEPPADLEKIGAPRAPS
KSRM
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggctcgcaagccaggcgcggtcccggtcagcccgcgtcgccgggccaggaccg
tgtcgtttcgcttcgagaaagagcgagagtttgcgaacaatctttccaacggtttttccg
cgagaaggatcaggcgcccccagaggcacatctcgagtgtctgcctccgtgtctcgtgtg
gctcctcgcctcccttcgtggcactgtcgtccggccccagccggaagccccgacagctat
agggtagcgttttaccagtatctttcagcattcccctcgacccgccttttctcgtccatg
ccgagaagtgaaacggacccccaatacgcgtcaggcggcagctcccccgagcacccgggt
gcagcgggagggaacggtccagcctactacagcgaccccaagagttctttcgcctccgtc
aacccccccgcatacacaggtcaagcgcttcctcccctctcctctgattcttgtccgtac
ccctactcgccttcctcgtattctcctgacctgggaccggtgacgtcgccctctgaccag
gcgttccctccctcctatgatccttcctactcccagggccagcctcacgcgtatgcgccg
ctccaaccccctcataacgcgtaccctccccccaagcacgaccctagctacagtgtgtac
ggaggacagaatgccacaggcttcggcgcccccacatacagccccccagccccctgccct
tcttacggcgcccaagcaggcgccccgtacccgccaccgggcggctacgcgcccaacccc
gggtaccctggcagccccgcgggtccctgggcctcaggccccggggcgggaccccggcgg
ggccacgcacctggttacggcgaccagcggtcgcgaggcactgaggcaccttggcgccac
agccagctgagtcaggatgggagccgccgagggaggtacgacgcaggggcgatggggtcg
cacctcgtcgagccaaagtggagtgaagagcagttggccccgatcgaaaaagacttttat
gtggagcatccgagcgtcgcttctcggacagatgaagaggtggcggcatttctcgaagcg
aacgcgatgcgtatcgatggccaggagccgaagccgcgaccagtcttctccttcgaggag
acggggttccccaccgcgatccagaaccaactaaggaagatgaacttcgcggaaccgaca
gcgattcaaaagatcggctggcccaccgctctgagtggtcgggacatgattggcattgcc
cagaccggaagcggaaagaccctcggcttcctcctccctggcctcgtccacgccgcggcc
cagcctccccttgcccagggccaggggccaattgtcctcgtgctcgcgcccacgcgcgaa
ttggcgatgcaaattcgccacgagtgcatgcgcttcaccgagggcctttccctcgcctcc
tcggaagacccacagcgagcggacacaaagttccgcaccgcctgcgtgtacggaggcgtc
cctagacaggggcaagcgaccgagctgagaaacggcgctgagatcctcatcgccacccca
ggccgactgatcgacttcctcgatctcggcgtcaccaatctgaagcgcgtctcctacatc
gtcctcgacgaagcagacagaatgatggatatgggcttcgagcctcaggtgcgaaaaatc
ttctctcaagttcgcccagatcgccagacccttctgtggtccgcgacttggcctaaggag
gtccgaggtctggcgagcgagttctgccggacaagagttgtcaaactgcaagtggggaaa
gccgacctacaagccaatgcgaatgtcacccagcgcatcgaagttgtttcttcgaatcag
ctgcagcatcgccttctgtcagttctgcaagaagaagtcaccggacagaaaactctcatt
ttttgcgagacgaaacgccagtgtgaccaactgtgccgcgagctccgataccgccaactc
cgcgccctggccattcacggagacaaggaacagcgtgaacgcgacagaatcctccatgac
ttccggaaaggcgactgcgagattcttctggcgactgacgtggcaagcagaggcctggac
attcaagatgtgaagttcgtcatcaattacgacgttccgaaaaacattgagtcgtacatc
catcgcatcgggcgtacgggacgagctgggaacaaaggaactgcaatcagtttctttcag
tacgacttctactcgccagaaaaggtcactatggctcggaagatctgtgaggtgatgcgc
tccgttggccaagagccgccagcggacctcgagaagatcggcgcacctcgagctccatcc
aaaagcagaatgtag
DBGET
integrated database retrieval system
