Toxoplasma gondii: TGME49_313350
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Entry
TGME49_313350 CDS
T01093
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
tgo
Toxoplasma gondii
Pathway
tgo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TGME49_313350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_313350
03036 Chromosome and associated proteins [BR:
tgo03036
]
TGME49_313350
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TGME49_313350
Chromosome and associated proteins [BR:
tgo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
TGME49_313350
COMPASS/SET1 complex (yeast)
TGME49_313350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
7895700
NCBI-ProteinID:
XP_002364546
UniProt:
A0A125YN87
LinkDB
All DBs
Position
XI:join(3298729..3298793,3299430..3299696,3300246..3300346,3300794..3300857,3301394..3301502,3301832..3301963,3302460..3302519,3303011..3303100,3303593..3303974,3304246..3304289)
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AA seq
437 aa
AA seq
DB search
MTAGKEGAGMYKVRVTEKLVRSLRATQVVDCALACQGGEEEENPKSEGLWRVTSVDWSQD
GTTILLALCPREAGEERWSPSSDRYSGNPQGNRETEERCAKLLVFSALTGSLTQIRETSW
RNIDAVRCLQGGARKCLVAISDSTPAVVLWSLDDNVLPVQYSLPAGVVPHTGVDVHPTSD
LFLASCLDGTVLLFHLDKAQALGHVRGSSSYPVSAFDCEGLVYACSLGNRKIHLFACDDD
AIDKEPAGQFSSFDLSSSLAPGSHITSLAFGPDEKTLLVCSNRGQVLLIDAFDGKKIHEY
NPPQSSSGSRPFLSSSRLSARASSRPCPPAFTPDGKFVLWGNSAAGEESIYFWKAVQTPV
DGSAQTAASPSGKGGERKHGLDPLLVARLKGDSTHEGGRERRSGENAHCDFVLFSRVHAL
MVTVSGGVLSFWQPPAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgggaaggagggcgctggaatgtataaggtcagggtgacggagaagctcgtt
cgaagcctaagagcgacgcaggtggtcgactgtgcgctggcgtgccaaggaggcgaagag
gaagaaaatccgaagtcggaaggtctctggagagtcacgagtgtcgattggtcgcaagac
ggaacgacaattctcctcgcgctctgtccaagagaggcgggagaggaacgctggtctcca
agttcagacagatactcgggaaacccgcaaggaaacagagagaccgaggaacgatgtgca
aagctgctcgtcttcagcgctcttacgggaagtttgacacagatacgtgaaacctcgtgg
aggaacatcgacgctgttcgatgccttcaaggaggcgcacgaaagtgtctcgtcgctatc
agcgatagtacacctgctgtcgtgttgtggtccctggacgacaacgtccttccagtgcaa
tactctctacctgcgggagttgttccccacactggcgtggacgtacacccaaccagcgat
ctgttcctcgcctcctgtctagacggaaccgttctgcttttccatttggacaaggcgcaa
gcactgggccatgttcgcggctcgtcgtcttaccccgtctccgctttcgactgcgaaggt
ctcgtctacgcgtgctctttgggaaacaggaaaatccaccttttcgcatgcgacgacgat
gccatcgacaaggaaccggctggtcaattcagcagcttcgatctctcctcttccctcgcc
ccaggctctcacatcacttctctcgctttcggtcccgacgagaagacgctgctcgtctgc
agcaaccgtggtcaggtgcttctcatcgacgcatttgatggcaaaaaaattcatgagtac
aatccgcctcagtcttcctctggctctcggccttttctgtcttcctcgcgcctctcggcc
cgggcgtcgtcccggccatgtccacccgcatttactccagacggaaaattcgtgttgtgg
gggaactccgcagcaggagaagagtcgatttatttttggaaagccgtccaaacgccagtg
gacgggagcgcacaaactgctgcctcgccttcaggaaagggaggcgagagaaagcatgga
cttgaccccctgctcgtcgcgcgactgaagggggacagtacgcatgagggagggcgagaa
aggagaagcggcgagaatgcacactgcgactttgttctcttcagcagagtgcatgcgctc
atggtcacagtttccggcggcgtcttgtctttctggcagcctcctgcggtttga
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