Entry |
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Name |
(GenBank) DNA gyrase, B subunit
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KO |
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Organism |
tgr Thioalkalivibrio sulfidiphilus
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Brite |
KEGG Orthology (KO) [BR:tgr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:tgr03032]
Tgr7_0004
03400 DNA repair and recombination proteins [BR:tgr03400]
Tgr7_0004
Enzymes [BR:tgr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tgr7_0004
DNA replication proteins [BR:tgr03032]
Prokaryotic type
DNA Topoisomerases
Tgr7_0004
DNA repair and recombination proteins [BR:tgr03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tgr7_0004
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4021..6444
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AA seq |
807 aa
MTDPQQAKTYDSSNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGY
CNKIQVIIHSDGSVSVQDDGRGIPVDIHPEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGL
HGVGVSVVNALSEWLELTIFRNSRVHRQVYRLGVPDAPLAEVGDTELTGTRVHFRPSTEI
FSDTEFHYDILSKRLRELSFLNSGVRIQLSDERSGKEDVFEYQGGIRAFVEHLNRNKTPL
HQNVIYCVADRDDITVEVALQWNDSYQENIFCFTNNIPQRDGGTHMAGFRAALTRGLNQY
MEAEGILKKQKVATTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKAVVEGVLYDH
LQSFLLENPGDAKVITAKIIDAARARDAARRAREMTRRKGALDVAGLPGKLADCQEKDPA
LSELFLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGC
GIGKDEFNADKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPVLIERGHVYIAQPPLYK
VKKGKQEQYVKDELELNNLLLQMALEDARLMIHPEAPPVSGEALEDLARRYIGVMGAVER
LSRRHDRDLLERMIFSTPMDPARIEDPQAIRAWFDGLVEGLRSDAAGAARYTVDAVPDGE
GGTEVRVTRLIHGAEQVERFGRDFFASPEYRAIRDLAERLDGLLDQGAAVHRGERRQPVS
NFRQVMDWLLGEARRGLNVQRYKGLGEMNPEQLWETTMNAETRRLLQVKIEDAVRADEVF
TTLMGDQVEPRREFIEANALTASNIDI |
NT seq |
2424 nt +upstreamnt +downstreamnt
atgactgatccgcagcaggccaagacttacgactcatccaacatcaaggtgctcaagggg
ctggacgccgtccgcaagcgccccggcatgtacatcggtgacacggatgacggcaccggc
ctgcaccacatggtgttcgaggtggtggacaatgccatcgacgaggccctggccggctac
tgcaacaagatccaggtgatcatccattccgacggctccgtgagcgtgcaggatgatggc
cggggcatcccggtggatatccacccggaagaaggtcggtccgccgcggaagtcatcatg
acggtgctgcatgcgggcggcaagttcgacgacaattcctacaaggtctccggcggtctg
cacggtgtgggtgtgtcggtggtgaatgccctgtccgaatggctggaactgaccatcttc
cgcaacagccgcgtgcatcgccaggtctatcgcctgggtgtgcccgatgcccccctggcg
gaggtgggtgacacggaactgaccggcacccgggtgcatttcagacccagcaccgagatc
ttctcggacaccgaattccactacgacatcctgtccaagcgcctgcgggagctgtccttc
ctgaactcgggtgtgcgcatccagctgagcgacgagcgcagcggcaaggaggatgtgttc
gagtaccagggcggaatccgtgccttcgtggagcatctgaaccgcaacaagacccccctg
caccagaacgtgatctactgcgtggcggaccgggacgacatcaccgtggaagtggccctg
cagtggaacgactcctaccaggagaacatcttctgcttcaccaacaacatcccccagcgg
gacggtggcacgcacatggcgggtttccgcgccgccctgacccgtggcctgaaccagtac
atggaggccgagggcattttgaagaagcagaaggtggccaccaccggtgatgatgcacgg
gaaggcctgaccgcggtcctgtcggtgaaggtgcccgaccccaagttctcgtcccagacc
aaggacaaactggtgtcctccgaggtcaaggccgtggtggaaggggtgctctacgaccac
ctgcagagcttcctgctggagaacccgggtgatgccaaggtcatcaccgccaagatcatc
gatgccgcgcgcgcccgggatgcggcccgccgtgcccgggagatgacccggcgcaagggt
gccctggacgtggccggcctgcccggcaagctggcggactgtcaggaaaaggatcccgcc
ctgtccgaactgttcctggtggagggtgattccgccggcggttcagccaagcagggtcgc
gaccgtcgcacccaggccatcctgcccctgaagggcaagatcctgaatgtggaaaaggcc
cgtttcgacaagatgctgtcctcggcggaggtgggtaccctgatcaccgccctgggttgt
ggcatcggcaaggatgaattcaacgctgacaagctgcgttaccaccgcatcatcatcatg
accgatgcggacgtggacggctcccacatccggaccctgctgctgaccttcttctaccgc
cagatgccggtgctgatcgagcgcggtcatgtctacatcgcccagccgccgctgtacaag
gtgaagaagggcaagcaggagcagtacgtcaaggacgagctggagctcaacaacctgttg
ctgcagatggccctggaggacgcccggctgatgatccatcccgaggccccgccggtgagc
ggcgaggccctggaggacctggcgcgccgctacatcggcgtcatgggggccgtggagcgc
ctgtcccgccgccatgaccgggatctgctggaacgcatgatcttctccacccccatggat
cccgcccggatcgaggacccccaggcaatccgtgcctggttcgacgggctggtggagggc
ctgcgcagcgatgccgccggggccgcccgctacaccgtggatgcggtgcctgatggcgaa
ggcggcaccgaggtgcgcgtcacccgcctgatccatggcgcagagcaggtggagcgcttc
ggacgggatttcttcgcctccccggaataccgggccatccgggatctggcagagcgcctg
gacggtctcctggaccagggtgccgccgtgcaccgtggcgagcgccgtcagccggtgagc
aacttccgccaggtgatggactggctgctgggcgaggcccgccggggcctgaacgtgcag
cgctataagggtctgggcgagatgaacccggaacagctctgggagaccaccatgaatgcc
gagacccgtcgcctgctgcaggtgaagatcgaggatgcggtgcgcgcagacgaggtgttc
accaccctgatgggtgatcaggtggagccgagacgcgagttcatcgaggccaatgccctc
acagcctccaacatagatatctga |