Thioalkalivibrio sulfidiphilus: Tgr7_0087
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Entry
Tgr7_0087 CDS
T00840
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03030
DNA replication
tgr03410
Base excision repair
tgr03420
Nucleotide excision repair
tgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tgr7_0087
03410 Base excision repair
Tgr7_0087
03420 Nucleotide excision repair
Tgr7_0087
03440 Homologous recombination
Tgr7_0087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgr03032
]
Tgr7_0087
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_0087
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tgr7_0087
DNA replication proteins [BR:
tgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tgr7_0087
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tgr7_0087
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tgr7_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACL71191
UniProt:
B8GTD1
LinkDB
All DBs
Position
91031..93742
Genome browser
AA seq
903 aa
AA seq
DB search
MSKTPPLVLVDGSSYLYRAFHALPPLTNSRGEPTGAVYGVANMLRKLLKDYAPEHVVVVF
DAKGKTFRDEMYAEYKANRPPMPDELAAQVEPLHQVVQAMGLPMLVVPGVEADDVIATLA
REGREHGLEVVISTGDKDMAQLVEPGVTLVNTMTDTKMDAEGVKEKFGVAPEQIVDYLAL
IGDTVDNVPGVDKVGPKTAVKWLEAYGSLDGIMEHAEEIKGKVGENLRAALGHLPLSREL
VTVRRDLELDVTPESLRLGEPDRETLRALFSRLEFRTWLKELESGEEQAQAASDDPTPGQ
PAQAYETILDEKALAAWMKRLETAELFAFDTETTSLDYMQAQVVGVSFAVKTGEAAYLPL
AHDYADAPQQLDRDETLKRLKPLLESARHKKLGHHLKYDRNVLLNHGIELNGIEHDTMLE
SYVLNSTASRHDMDSLAQKYLDYRTTHYEEVAGKGAKQIPFSQVRIEDATPYAAEDADIT
LRLHEHLWPQLSAAEGQCRVYREIEMPLVPVLSRMERTGVKVDAERLFAQSHELAERMGQ
IEREAHEVAGGAFNLGSPKQIQEILYERQKLPVLRKTPKGQPSTAEDVLEQLALDYPLPK
LILEHRSLSKLKSTYTDKLPERIDPDTGRVHTSYHQAVASTGRLSSSDPNLQNIPIRTEE
GRRIRQAFVAPSGRRLVAADYSQIELRIMAHLSGDAGLLRAFAEGQDIHRATAAEVFGVG
LDQVSGEQRRAAKAINFGLIYGMSAFGLARQLGIERGDAQDYVDRYFARYPGVKDYMEST
REKARDLGYVETLFGRRLYLPDINARNGQIRAQAERVAINAPMQGTAADIIKRAMIQVDQ
WIRESRIPAVMILQVHDELVLEVDEDAVDKVREELCVRMSQAAELKVPLVVEAGVGDNWD
DAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagaccccgcccctggtgctggtggatggatcctcctacctgtatcgcgccttc
cacgccctgccgcccctgaccaattcccggggtgaacccaccggggccgtctatggtgtg
gccaacatgctgcgcaagctgctcaaggactacgcgccggagcacgtggtggtggtgttc
gatgccaagggcaagaccttccgggacgagatgtacgccgagtacaaggccaaccgcccg
cccatgcccgacgagctggccgcccaggtggagcccctgcaccaggtggtccaggccatg
ggcctgcccatgctggtggtccccggggtggaggcggacgacgtgatcgcgaccctggcc
cgcgagggcagggaacacggcctggaggtggtgatctcaaccggcgacaaggacatggcc
cagctggtggagcccggggtgaccctggtgaacaccatgaccgacaccaaaatggatgcc
gagggggtcaaggagaagttcggcgttgcgccggagcagatcgtggattacctggcgctg
atcggcgacaccgtggacaacgtgcccggggtggacaaggtggggcccaagaccgcagtg
aagtggctggaggcctacggcagtctcgacggcatcatggaacacgcggaggagatcaag
ggcaaggtgggcgagaacctgcgcgcggccctgggccacctgcccctgtcccgggagctg
gtgaccgtgcgccgggacctggaactggacgtgacgcccgagtccctgcgtctcggcgag
ccggaccgggagaccctcagggcgctgttctcccgcctggaattccgcacctggctcaag
gaactggagtcgggcgaagagcaagcccaggccgcatccgatgacccgacacccggccag
cccgcccaggcctacgagacgatcctggacgaaaaggccctggccgcctggatgaagcgc
ctggagacggcagagctgttcgccttcgacaccgagaccaccagcctggactacatgcag
gcgcaagtggtgggggtctccttcgccgtgaagaccggcgaggccgcctacctgccgctc
gcccatgactacgccgatgcgccccagcaactggatcgggacgagacgctgaagcgcctc
aagcccctgctggagagcgccaggcacaagaagctcggccatcacctcaaatatgaccgc
aacgtgctgctcaaccacggcatcgagttgaacggcatcgagcacgacaccatgctggag
tcctacgtgttgaacagcacggcgagccgtcacgacatggacagcctggcccagaagtac
ctggactaccgcaccacccactacgaggaagtggccggcaagggggccaagcagatcccc
ttctcccaggtgcgcatcgaggacgccaccccctacgccgccgaggacgcggacatcacc
ctgcgcctgcatgaacacctctggccgcagctctcggccgccgagggccagtgccgggtg
taccgggagatcgagatgcccctggtgccggtgctctcgcgcatggagcgcaccggggtg
aaggtggacgccgagcgcctgttcgcccagagccacgagctggccgagcgcatgggccag
atcgagcgggaggcccatgaggtggccggcggggccttcaacctgggctcacccaagcag
atccaggagatcctgtacgagcgccagaagctgccggtgctcaggaagacccccaagggc
cagccctccaccgccgaggacgtgctggagcagctggccctggactatccgctgccgaag
ctgatcctggagcaccgctcgctgtccaagctcaagtccacctacaccgacaagctgccg
gagcgcatcgacccggacaccggccgggtgcacacctcctatcaccaggcggtggcctcc
accgggcgcctgtcctcctcggaccccaacctgcagaacatccccatccgcaccgaggag
ggccggcgcatccgccaggccttcgtggccccttcgggccggcggctggtagcggcggac
tactcccagatcgagctgcgcatcatggcccacctgtccggggacgccggcctgctcagg
gccttcgccgagggtcaggacatccaccgggccaccgccgccgaggtcttcggcgtgggc
ctcgaccaggtctccggcgagcagcgccgggccgccaaggccatcaacttcgggctcatc
tacggcatgtccgccttcggcctggcccgccagctgggcatcgagcggggcgacgcccag
gactacgtggaccgctatttcgcccgctatcccggcgtgaaggactacatggaatccacc
cgggaaaaggcccgggatctgggctacgtggagaccctgttcggccggcgcctgtacctg
ccggacatcaatgcccgcaacggccagatccgcgcccaggcggagcgggtggccatcaac
gcccccatgcagggcaccgccgcggacatcatcaagcgggccatgatccaggtggatcaa
tggattcgcgaatcacgaataccggcggtgatgatcctgcaggtgcacgacgaactggtg
ctggaggtggacgaggacgcggtggacaaggtgcgtgaggagctgtgcgtgcgcatgtcc
caggccgccgagctcaaggtgcccctggtggtggaggccggggtgggggataactgggat
gatgcacattag
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