Thioalkalivibrio sulfidiphilus: Tgr7_0439
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Entry
Tgr7_0439 CDS
T00840
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tgr7_0439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgr03019
]
Tgr7_0439
03110 Chaperones and folding catalysts [BR:
tgr03110
]
Tgr7_0439
03029 Mitochondrial biogenesis [BR:
tgr03029
]
Tgr7_0439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgr04147
]
Tgr7_0439
Enzymes [BR:
tgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Tgr7_0439
Messenger RNA biogenesis [BR:
tgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tgr7_0439
Chaperones and folding catalysts [BR:
tgr03110
]
Heat shock proteins
HSP60 / Chaperonin
Tgr7_0439
Mitochondrial biogenesis [BR:
tgr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Tgr7_0439
Exosome [BR:
tgr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tgr7_0439
Exosomal proteins of other body fluids (saliva and urine)
Tgr7_0439
Exosomal proteins of breast cancer cells
Tgr7_0439
Exosomal proteins of colorectal cancer cells
Tgr7_0439
Exosomal proteins of bladder cancer cells
Tgr7_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACL71537
UniProt:
B8GL19
LinkDB
All DBs
Position
462037..463677
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEVRFSDDARSRMVRGVNVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELEDKFENMGAQMVKEVSSQTSDIAGDGTTTATVLAQAIVREGMKSVTAGMNPMDLKRGI
DKAVIAAVEELKKLSKPCTDSKAIAQVGTISANSDESIGQIIADAMAKVGKEGVITVEEG
SSLENELDVVEGMQFDRGYLSPYFVNNQQNMSAELDDCFVLLYDKKISNIRDLLPVLEGV
AKAGKPLLIIAEDIEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEEVGLSLEKASLDDLGQAKRIVVTKENSTIIDGAGKPDEIKGRVEQIRAQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQALKSLKGANHDQDIGIAIARRAMEEPLRQIVSNCGEEPSVVLNNVVEGKGNYGYNA
ATGEYGDMIEMGILDPTKVTRSALQNAASVSGLIITTEAMVAELPKKGDSAPAGGGMGDM
GGMGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaagaagtccgcttcagtgatgacgcccgttcccgcatggtccgtggcgtg
aacgtcctggccaatgccgtgaaggtcaccctgggtcccaagggccgcaatgtggtgctg
gagaagtccttcggcgcccccaccgtgaccaaggacggcgtgtccgtggccaaggagatc
gaactggaagacaagttcgagaacatgggtgcccagatggtgaaggaagtctcctcccag
acctccgacatcgccggtgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgagggcatgaagtccgtgaccgccggcatgaaccccatggacctcaagcgcggcatc
gacaaggccgtgatcgccgccgtggaagagctgaagaagctgtccaagccctgcaccgac
agcaaggccattgcccaggtgggcaccatctccgccaactccgacgagtccatcggccag
atcatcgccgatgccatggcgaaggtgggcaaggaaggcgtgatcaccgtggaggaaggt
tcctccctggagaacgagctggacgtggtggaaggcatgcagttcgaccgcggctacctg
tccccctacttcgtcaacaaccagcagaacatgagcgccgagctggatgactgcttcgtg
ctgctctacgacaagaagatctccaacatccgcgacctgctgcccgtgctggaaggcgtc
gccaaggccggcaagcccctgctgatcatcgccgaggacatcgagggcgaggccctggcc
accctggtggtgaacaccatccgcggcatcgtgaaggtggccgccgtgaaggccccgggc
ttcggtgaccgtcgcaaggccatgctgcaggatatcgccatcctgaccggcggccaggtg
atctccgaagaggtcggcctgtccctggagaaggccagcctcgacgacctgggccaggcc
aagcgcatcgtggtgaccaaggaaaacagcaccatcatcgacggcgccggcaagcccgac
gagatcaagggtcgtgtggagcagatccgtgcccagatcgaggacgccacctctgattac
gacaaggagaagctccaggagcgcgtggccaagctggccggcggcgtggccgtgatcaag
gtcggtgccgccactgaggtggaaatgaaggagaagaaggcccgcgtggaagacgccctg
cacgccacccgcgctgcggtggaagaaggcgtggtgcccggcggcggtgtcgccctggtg
cgtgccctgcaggccctcaagagcctcaagggtgccaaccacgaccaggacatcggcatc
gccatcgcccgtcgcgcaatggaagagcccctgcgtcagatcgtgtccaactgcggcgaa
gagccctccgtggtgctgaacaacgtggtggaaggcaagggtaactacggttacaacgcc
gccaccggcgagtacggcgacatgatcgaaatgggtatcctggatcccaccaaggtcacc
cgcagcgccctgcagaacgccgcttccgtgtccggtttgatcatcaccaccgaggcgatg
gtcgccgagctgccgaagaagggcgactccgcccccgccggcggcggcatgggcgacatg
ggcggcatgggcatgatgtaa
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