Thioalkalivibrio sulfidiphilus: Tgr7_1005
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Entry
Tgr7_1005 CDS
T00840
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgr03016
]
Tgr7_1005
Enzymes [BR:
tgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tgr7_1005
Transfer RNA biogenesis [BR:
tgr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tgr7_1005
Prokaryotic type
Tgr7_1005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACL72093
UniProt:
B8GP04
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All DBs
Position
1087219..1088142
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AA seq
307 aa
AA seq
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MNKPKIQRRDVHGIVLLDKPQGYSSNQALQRVKYLFRARKAGHTGSLDPLATGLLPLCFG
EATKVSGFLLDADKHYRTRCRLGQTTDTADAEGQVLATRPVPALDEALIEAALAPFRGPI
HQVPPMYSALKHQGQRLYELARKGEEVERKARDVTIHALSCLGFTADTLELDVHCSKGTY
IRTLVEDIGERLGCGAHVIELRRLGLGPFEAPAMVTLEEIEARAEQGEAALDALLAPIDS
ALTQWPAVRLDRDSAYYLRQGQAVFVPGAPTRGMVRVYGPGETFLAMGEILDDGRVAPRR
LMMMGQA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacccaagatccagcgccgggacgtgcatggcatcgtgttgctggacaagccc
cagggctacagttccaaccaggccctgcagcgggtgaagtatctgttccgggcgcgcaag
gcgggtcataccggcagcctggatccgctggccaccggcctgctgcccctgtgcttcggc
gaggccaccaaggtgtcgggcttcctgctggacgcggacaagcattaccgcacccgttgc
cgcctgggacagaccaccgacaccgccgatgccgagggccaggtgctggcgacccggccg
gtgccggccctggacgaggcgctgatcgaggccgccctggccccgttccgcggccccatc
caccaggtgccgcccatgtactcggcgctcaagcaccaggggcaacggctctacgaactg
gcccgtaagggcgaggaagtggagcgcaaggcccgggatgtcaccatccatgccctgagc
tgcctgggattcacggcggacaccctggagctggacgtgcactgttccaagggcacctac
atccgcaccctggtggaggacatcggcgagcggctcggctgtggtgcccacgtgatcgag
ttgcgccgtctggggctcgggcccttcgaggccccggccatggtcaccctggaggagatt
gaggcccgcgcggagcagggcgaggcggccctggatgccctgctggcccccatcgacagc
gcgctcacccagtggccggcggtgcgcctggaccgggacagcgcctattaccttcgccag
ggtcaggcggtgttcgtgcccggcgcgccgacccggggcatggtgcgggtctatggcccg
ggggagaccttcctggccatgggcgagatcctggacgatggccgggtggccccccggcgt
ctgatgatgatggggcaggcctga
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