Thioalkalivibrio sulfidiphilus: Tgr7_1007
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Entry
Tgr7_1007 CDS
T00840
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tgr7_1007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgr03019
]
Tgr7_1007
03016 Transfer RNA biogenesis [BR:
tgr03016
]
Tgr7_1007
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Tgr7_1007
Messenger RNA biogenesis [BR:
tgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tgr7_1007
Transfer RNA biogenesis [BR:
tgr03016
]
Prokaryotic type
tRNA degradation factors
Tgr7_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
KH_SLS1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
ACL72095
UniProt:
B8GP06
LinkDB
All DBs
Position
1088582..1090663
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AA seq
693 aa
AA seq
DB search
MTAIKKSFQYGQHTVTFETGEIARQASGAVLVNMADTVVLVTAVGLKDVAQGRDFFPLTV
NYQERTYAAGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIATVMSMN
PEVDPDVPAMLGASAALALSGLPFKGPIGAARVGYLNGAYVLNPSMSELKHSDLDLVVAG
TEKAVLMVESEAKLLSEEVMLGAVMYGHEQMQAAIKVINELAAEAGKPAWDWVAPEENVA
LKEAVAAACEAELTAAYQIAEKQARNQQVNALRDAVVAKLATGEEGAPSAEKVKGAFGAL
EKRIVRSRVLKGEPRIDGRDTRTVRPITVKTGVLPRTHGSALFTRGETQAIVVATLGTDR
DAQLIEAIEGERRERFMLHYNFPPFCTGETGMVGSPKRREIGHGRLAKRGVQAVMPGEAE
CPYVLRVVSEITESNGSSSMASVCGTSLALMDAGVPLKAPVAGIAMGLIKEGDAFAVISD
ILGDEDHLGDMDFKVAGSKDGVSALQMDIKIDGITREIMEKALAQAKEGRLHILEKMNAV
LSEPRTEVSAYAPRFTTLKIHPDKIRDVIGKGGATIRALTEETGTSIDISDDGTVKIASV
DKAAGDEARRRIEELTADVEVGRIYEGRVVKIMDFGAFVTILPGRDGLVHISQISEERVE
SVSDRLTEGDLVKVKVLEVDKQGRIRLSMKEVG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccatcaagaagtccttccagtacggtcagcataccgtcaccttcgaaaccgga
gagattgcgcgccaggccagcggcgcggtcctggtcaacatggccgacaccgtggtgctg
gtcaccgccgtgggtctgaaggacgtggcgcagggccgggacttcttcccgctgacggtg
aactaccaggaacgcacctatgccgcgggtcgcatccccggcgggttcttcaagcgtgag
ggtcgtcccaccgagaaggagaccctgacctcccggctgatcgaccgtcctatccggccg
ctgttcccgaagggcttcatgaacgaggtgcaggtcatcgccacggtgatgtccatgaac
cccgaggtggatcccgacgtcccggccatgctgggcgcctccgctgccctggccctgtcc
ggcctgcccttcaagggccccatcggtgccgcccgcgtgggttacctgaatggcgcctac
gtgctcaatccgagcatgtccgaactcaagcactccgatctggacctggtggtcgccggc
accgagaaggccgtgctcatggtggagtccgaggcgaagctgctctccgaggaggtcatg
ctgggcgcggtgatgtacggccatgagcagatgcaggccgccatcaaggtgatcaacgaa
ctggccgccgaggccggcaagcccgcctgggactgggtcgcgccggaagagaacgtggcg
ctcaaggaagccgtggccgccgcctgcgaggcggagctgaccgccgcctaccagatcgcc
gagaagcaggcccgtaaccagcaggtcaacgccctgcgcgatgccgtggtcgccaagctg
gccaccggcgaggagggcgcgccctccgccgagaaggtcaagggtgccttcggcgccctg
gaaaaacgcatcgtgcgcagccgggtgctcaagggcgagccccgcatcgacggacgcgac
acccgcaccgtgcgcccgatcaccgtcaagaccggcgtgctgccgcgcacccatggttcc
gccctgttcacccgtggcgagacccaggccatcgtggtggccaccctgggcacggatcgc
gatgcccagctgatcgaggccatcgagggtgagcgccgcgagcgattcatgctgcactac
aacttcccccccttctgcaccggtgagaccggcatggtgggttcgcccaagcgccgcgag
atcggtcacggccgtctggccaagcgcggtgtgcaggccgtgatgcccggcgaggcggaa
tgcccctacgtgctgcgcgtggtctccgagatcaccgagtccaacggttccagctccatg
gcctccgtgtgcggcaccagcctggccctgatggacgccggcgtgcccctgaaggccccc
gtggccggtatcgccatgggcctgatcaaggaaggcgacgccttcgccgtgatctccgac
atcctgggtgacgaggatcacctgggcgacatggacttcaaggtggccggcagcaaggac
ggtgtgtccgccctgcagatggacatcaagatcgatggtatcacccgcgagatcatggaa
aaggccctggcccaggcgaaggaaggccgtctgcacatcctggaaaagatgaacgcggtg
ctcagcgagccccgcacggaggtgtccgcctacgcgccgcgcttcaccaccctcaagatc
catccggacaagatccgcgacgtgatcggcaagggcggcgccacgatccgcgccctgacc
gaagagaccggcaccagcatcgatatctccgacgacggtaccgtgaagatcgcctccgtg
gacaaggccgccggtgatgaggcccgccgccgcatcgaggagctcaccgccgacgtggaa
gtgggccgcatctacgagggccgcgtggtcaagatcatggacttcggcgccttcgtcacc
atcctgcccggccgcgacggtctggtgcacatctcccagatctccgaagagcgggtggag
agtgtctccgaccgcctgaccgagggggatctggtgaaggtgaaggtgctggaagtggat
aagcaggggcgtattcgtctcagcatgaaggaagttggctga
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