Thioalkalivibrio sulfidiphilus: Tgr7_1024
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Entry
Tgr7_1024 CDS
T00840
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03030
DNA replication
tgr03430
Mismatch repair
tgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tgr7_1024
03430 Mismatch repair
Tgr7_1024
03440 Homologous recombination
Tgr7_1024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgr03032
]
Tgr7_1024
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1024
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tgr7_1024
DNA replication proteins [BR:
tgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tgr7_1024
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tgr7_1024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
ACL72111
UniProt:
B8GP22
LinkDB
All DBs
Position
complement(1111187..1111897)
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AA seq
236 aa
AA seq
DB search
MSFLSTLFGNHPNLDPGIEDRLARWRALPEPSARTSLDEARFVVIDVETTGLDLSRSELL
SVGLVPVGPHGIELGGLDEIVLRREVTRIDKDNLVVHGISPTESAAGVDIHEALSSVLER
IGKTWLVAFHADFDRIILGRTLRKQLGVKLRNPFLDLAMLLPALYSEGTAGLKGLDDWLG
HFAIPCPVRHRASADALVTAELLLLALAEARRQNHNDLRALDGLAQTQAKLHLMRH
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctgagcactctgttcggcaaccaccccaacctcgatccgggcatcgaggac
cgcctcgcccgctggcgcgccctgccggagccctcggcccgcaccagcctggacgaggcc
cgcttcgtggtcatcgacgtggagaccaccggtctcgatctcagccgcagcgagctgctg
tccgtgggcctggtgccggtgggccctcatgggattgaactgggcggcctggacgagatc
gtgctgcgccgcgaggtgacccgcatcgacaaggacaacctggtggtgcacggcatctcg
cccacggaatccgccgccggcgtggacatccacgaggccctctccagcgtgctggagcgc
atcggcaagacctggctggtggccttccacgccgacttcgatcgcatcatcctgggccgc
accctgcgcaagcagctgggcgtgaagctgcgcaacccgttcctggatctggccatgctg
ctgcccgccctctacagcgagggcaccgcaggcctcaagggcctggacgactggctcggc
catttcgccatcccctgcccggtgcgccaccgggcctcggcggatgccctggtgacggcg
gaactcctgctcctggcgctggccgaggcacgacgccagaaccataacgatctcagggcc
ctggacgggctggcgcagacccaggcgaagctgcacctgatgcgccactaa
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