Thioalkalivibrio sulfidiphilus: Tgr7_1049
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Entry
Tgr7_1049 CDS
T00840
Name
(GenBank) extracellular solute-binding protein family 3
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tgr01011
]
Tgr7_1049
Enzymes [BR:
tgr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Tgr7_1049
Peptidoglycan biosynthesis and degradation proteins [BR:
tgr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Tgr7_1049
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
ACL72136
UniProt:
B8GPG9
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All DBs
Position
1138977..1140395
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AA seq
472 aa
AA seq
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MQHLELLGFLILVAITLLFAFNNPRSALDRVLDRGELVVAMRVGPTTYFSGPDGVTGFEY
ELAQAFAERLGVRLRVVVPDRFEEILPMVERGRVDLAAAGITVTEQRRQQVRFGPAYKEV
TEQLVYRMGRESRPRTLADLNGQTLGVLPGSTHASRLSELQSEFPELNWQETAHGDIKSL
LREVWRGGLELAVADSVELASLQRFYPELRAAFDISEPRSLAWALPRVRDDSLYDQVLAF
FEEIRENGWLEQLLERHFGHVEVLDYVGTVTFVQQVDERLSEYLDLFKEAAELHGMDWRL
LAAISYQESHWNPRAVSPTGVRGMMMLTQNTAAQLGVSNRMDPRESVMGGAEYFRHMHSR
IPDRIPEPDRTWLALAAYNVGLGHLEDARRLTEGQGRNPDRWMDVMAHLPLLAQENWYRR
TRFGYARGWEPVIYVQNIRSYYDLLVWMTDESGGRPPPLPKIEPLNILPPGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacctggaactgctgggattcctgatcctggtggccatcacgttgctgtttgcc
ttcaacaacccccgcagcgccctggaccgggtgctggaccggggtgagctggtggtggcc
atgcgggtggggccgaccacctatttttccggtccggacggggtgacgggctttgagtat
gagctggcccaggcctttgccgagcgcctgggcgtgcgcctgagggtggtggtgccggat
cgcttcgaggagatcctgcccatggtggagcgtgggcgggtggacctggcggcggcgggg
atcacggtgaccgaacagcgtcgccagcaggtccgcttcggcccggcctacaaggaggtc
accgagcagctggtgtatcgcatgggcagggagtcacgcccccggaccctggcggacctc
aacggccagaccctgggggtgctcccgggcagcacccatgcgagccggctgagcgagctg
cagtcggagttcccggagctgaactggcaggaaaccgcccacggtgacatcaagagcctg
ctgcgggaggtctggcgcggtggcctcgagctggcggtggcggactcggtggaactggcc
tccctgcagcgcttctatcccgaattgcgagcggccttcgacatctccgaaccccggtcc
ctggcctgggccctgcccagggtgcgggatgacagcctctacgaccaggtgctggccttc
ttcgaggagatccgggagaacggctggctggagcagctgctggaacggcatttcggtcat
gtggaggtgctggactatgtgggtacggtcaccttcgttcagcaggtggacgagcggctc
tccgagtacctggacctgttcaaggaggctgccgagctccatggcatggactggcgcctt
ctggcggccatcagttaccaggagtcccactggaacccccgggcggtctcacccaccggc
gtgcgcggcatgatgatgctgacccagaacaccgccgctcagctcggcgtgagcaaccgc
atggatccccgggagagcgtgatgggaggcgcggagtacttcaggcacatgcattcacgt
atccctgaccgtattcccgagccggatcgcacctggctggccctggcggcctacaacgtg
gggctgggacacctggaggacgcccggcgcctcaccgaggggcagggacgcaacccggac
cgctggatggacgtgatggcgcacctgcccctgctggcccaggaaaactggtaccggcgc
acccgcttcggttacgcccggggctgggagccggtgatctacgtgcagaacatccgcagc
tattacgacctgctggtgtggatgactgatgagtccggcggccgtcccccgcccctgccc
aagatcgaaccgctgaacatcctgcccccgggcctctga
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