Thioalkalivibrio sulfidiphilus: Tgr7_1176
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Entry
Tgr7_1176 CDS
T00840
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03030
DNA replication
tgr03430
Mismatch repair
tgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tgr7_1176
03430 Mismatch repair
Tgr7_1176
03440 Homologous recombination
Tgr7_1176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgr03032
]
Tgr7_1176
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1176
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tgr7_1176
DNA replication proteins [BR:
tgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tgr7_1176
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tgr7_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
T2SSK
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACL72262
UniProt:
B8GQ67
LinkDB
All DBs
Position
1265253..1268741
Genome browser
AA seq
1162 aa
AA seq
DB search
MTTSFVHLHLHTEFSLVDGLVRVEPLVQAVREAGMPAVAVTDQGNLFGMVKFYKAALKAG
IKPIVGVDTWVSAPQAGEAPSRLVLLAQDEDGYRNLTRLISRSYQEGQQSGDAPVLDRGW
FDGASRGLIALSGGREGEIGRALMGSQPSAAEELCEFWEGLFPGRFYLEIGRTGREGEED
HLHAAVDLAQSRSLPVVATNDVRFLAASDFDAHEARVCIHDGRVLDDPRRPRDYTPQQYL
RTAEEMAALFADIPEALENSVEIARRCNVSLTLGKSVLPEYPVPAGMTTDDYFRKASREG
LDARLAVILEGVTDNREAKERAYRERLEIELDVICQMGFPGYFLIVADFIQWAKDNAIPV
GPGRGSGAGSLVAYALKITDLDPLLYDLLFERFLNPERVSMPDFDIDFCMEQRDRVIDYV
AQRYGREKVSQIITHGTMAAKAVVRDVGRVLGHPYGFVDRIAKLIPFEIGMTLDKALEQE
EELRRLYEEDEEVSGLIDLARKLEGVARNAGKHAGGVVIAPTELTDFSPLYCEPGGQSVV
THFDKDDVEAVGLVKFDFLGLRTLTIIDWAVRTIDQQRKAEGQAPLDVNRIPLDDPETFG
LLKRQETTAVFQLESRGMKELIKRLQPDVFEDIVALVALYRPGPLQSGMVDDFINRKHGR
AKVDYPHPDLEPILKPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEMAKQ
REIFLAGATGRGVQEATASYIFDLMEKFAGYGFNKSHSAAYALLSYQTAWLKQHYPAAFM
SAVLSADMDHTDKVVNLIEECRAMELHVVPPDINRSQHRFGVADARTVIYGLGAIKGVGE
SAIQALIQAREAGGPFQSLDDLCVRADSQKINRRTLEALIRAGALDSIGPNRATLMANLP
KALSRAEQHLRNESLGQEDLFGGPVTPGASDVDDEQLPEWDEDLRLSAEKETLGLYLTGH
PIDRFQAELKAIHSKRIADLVAEVGDQTPGEGRRRKEQQATVGGLVINIRTKPTQTGRIG
FVTLDDRSGRIEVGLFGEDFNRYQHLLVKDRLLVVQGQAGVDEFNGGVRLRARQVMDLDE
ALSQCVKGLDLRVLGRPVNGLVDELKDALAPSREGPCPVYIHYRDDRFQACFELGEDWRV
RPSGDLIARLRGLLGEDAVALR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagcttcgtacatctgcatctgcataccgaattctccctggtggatggtctg
gtgcgcgtggagccgctggtgcaggcggtgcgcgaggcgggcatgccggcggtggcggtc
accgaccagggcaacctgttcggcatggtgaagttctacaaggcggcgctcaaggcgggc
atcaagcccatcgtgggcgtggatacctgggtctcggcgccccaggcaggtgaggccccc
tcgcggctggtgctgctggcccaggacgaggacggataccgcaatctcacccggctgatc
tcgcgaagctaccaggagggtcagcagagcggcgacgcgccggtgctcgatcgcggctgg
ttcgacggcgcgagccgcggcctgatcgcactctccggggggcgcgagggcgagatcggc
cgcgcgctcatgggcagccagccctctgccgccgaggagctgtgtgaattctgggaaggc
ctgttcccggggcgcttctacctggagatcgggcgcaccgggcgtgaaggcgaggaggac
cacctccatgccgcggtggacctggcccagtcccgctccctgccggtggtggccaccaac
gacgtgcgcttcctggcggcctccgacttcgacgcccacgaggcccgggtgtgcatccac
gacggccgggtgctggatgatccccgccggccccgggactacaccccgcagcagtatctg
cgcaccgccgaggagatggcggcgctgtttgccgacatccccgaggccctggaaaactcc
gtggagatcgcccggcgctgcaatgtctccctgacgcttggcaagtcggtgctgccggag
tacccggtccccgcgggcatgaccaccgacgactacttccgcaaggcctcccgggagggc
ctggacgcacgcctggcggtgatcctcgagggcgtcacggacaaccgcgaggcaaaggag
cgcgcctaccgggagcgcctggagatcgagctggacgtgatctgccagatgggcttcccg
ggctactttctgatcgtggcggacttcatccagtgggccaaggacaacgccatcccggtg
ggtcccgggcgtggttccggcgccggatccctggtggcctacgcgctcaagatcaccgat
ctggacccgctgctctacgacctgctgttcgagcgtttcctcaatcccgaacgcgtctcc
atgcccgatttcgatatcgacttctgcatggagcagcgcgaccgggtgatcgactacgtg
gcgcagcgctacggccgcgagaaggtctcccagatcatcacccacggcaccatggccgcc
aaggcggtagtgcgcgacgtgggccgggtgctgggccacccctacggcttcgtggaccgt
atcgccaagctgatccccttcgagatcggcatgaccctggacaaggccctggagcaggag
gaggagctgcgccgcctctacgaggaggacgaggaggtcagcgggctgatcgacctggcc
aggaagctcgagggcgtggcgcgcaacgcgggcaagcatgccggcggcgtggtgatcgcc
cccaccgagctcaccgacttctcgccgctgtattgcgaaccgggcgggcagagcgtggtg
acccacttcgacaaggacgacgtggaggcggtgggcctggtgaagttcgacttcctgggc
ctgcgcacgctgaccatcatcgactgggcagtgcgcaccatcgaccagcagcgcaaggcc
gagggccaggcgcccctggacgtgaaccgcatccccctggacgacccggagaccttcggc
ctgctcaagcgccaggagaccaccgcggtcttccagctggaatcccggggcatgaaggag
ctcatcaagcgcctgcagccggacgtgttcgaggacatcgtggccctggtggccctgtac
cggccgggtccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggccgg
gccaaggtggactatccccacccggacctggagcccatcctcaagcccacctacggcgtg
atcctgtaccaggagcaggtgatgcagatcgcccaggtgctggcgggctacaccctgggc
ggcgccgacatgctgcgccgggccatgggcaagaaaaaacccgaggagatggccaagcag
cgggagatcttcctggccggcgccaccggccggggcgtgcaggaggccaccgccagctac
atcttcgacctgatggagaagttcgccggctacggcttcaacaagtcccattccgccgcc
tacgcgctgctttcctaccagaccgcctggctcaagcagcactacccggcggccttcatg
tccgcggtgctgtccgcggacatggaccacacggacaaggtggtgaacctcatcgaggaa
tgccgggccatggaactgcatgtggtgcctccggacatcaaccgctcccagcaccgcttc
ggggtggccgatgcccgcacggtgatctatggcctgggggccatcaagggggtgggcgag
tccgccatccaggccctgatccaggcccgggaggcgggcggcccgttccagagcctcgat
gacctgtgcgtgcgtgccgactcccagaagatcaaccgccgcaccctggaggccctgatc
cgggccggggccctggattccatcggccccaatcgggcgaccctgatggccaatctgccc
aaggccctgtcccgggccgagcagcacctgcgcaatgagagcctgggtcaggaggacctg
ttcggtggcccggtcaccccgggtgcctcggacgtggacgacgaacagctgccggaatgg
gacgaggacctgcgcctgtccgccgagaaggagaccctggggctgtacctcaccgggcac
cccatcgaccgcttccaggcggagctcaaggccattcacagcaagcgcatcgccgacctg
gtggccgaggtgggtgaccagacacccggagaagggcggcggcgcaaggaacagcaggcc
accgtgggtggcctggtgatcaacatccgcaccaagcccacccagaccgggcgcatcggc
ttcgtgaccctggacgaccgcagcgggcggatcgaggtgggcctgttcggggaggacttc
aaccgctaccagcacctgctggtgaaagaccggctgctggtggtccagggccaggccggg
gtggacgagttcaacggcggtgtgcgcctgcgcgcccgccaggtcatggacctggacgag
gccctgtcccagtgcgtgaagggcctggacctgcgcgtcctgggacggcccgtgaacggc
ctggtggatgaactcaaggatgccctggcccccagtcgggaagggccttgcccggtctac
atccattaccgggacgaccgcttccaggcctgcttcgaactgggcgaggactggcgggtc
aggcccagcggtgacctgatcgcccgcctgcgggggctgctgggggaggatgcagtggcg
ctgcgttag
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