Thioalkalivibrio sulfidiphilus: Tgr7_1394
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Entry
Tgr7_1394 CDS
T00840
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1394
Enzymes [BR:
tgr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Tgr7_1394
DNA repair and recombination proteins [BR:
tgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Tgr7_1394
Prokaryotic type
Tgr7_1394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACL72479
UniProt:
B8GR59
LinkDB
All DBs
Position
complement(1491528..1492979)
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AA seq
483 aa
AA seq
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MKTLLWFRRDLRLTDNPALARALEDGEVIPVYIHAPEEEGDWAPGGASLWWLHHSLAALG
EDLRARGVDLVIRQGASLETLQALIRETGAQQVLWNRLYEPALIARDTGIKQQLRDQGIR
TQSFNAALLFEPWTVAKQDGTPYKVFTPFWKACLGLGVPVDVTPAPERIQGPAQLPPGET
LKSLGLLPDIDWAAGFTELWQPGEAGALARLAEFMDEAVADYDEMRNRPDRDGSSRLSPY
LHFGEIGPRQAAAACQVAKDRHGGKAAHQGIDSFLREIGWREFAHHLLYHFPRTSDEPLD
PRFRKLPWRELDEETLRAWQRGRTGIPLVDAAMRALWATGWMHNRVRMIVASLLTKNLGA
HWLTGARWFWDTLVDADLAGNTLGWQWTAGCGADAAPYFRVFNPVLQGERFDPNGDYLRQ
WVPELAKLPAKYIHRPWEAPEAILKAAGVRLGGNYPRPIVDLAESRRQALEMWEVIKGTK
DEG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccctgctctggttccggcgcgacctgcgcctgaccgacaacccggcgctggcc
cgggcgctggaagacggcgaggtgatccccgtctacatccatgccccggaggaggaaggc
gactgggcacccggcggcgcgagcctctggtggctgcaccacagcctcgccgccctgggc
gaggacctgcgcgcccggggggtggatctcgtcatccgccagggtgcgagtcttgagacc
ctgcaggccctgatccgggagaccggggcccaacaggtgctctggaaccggctctacgaa
ccggcgctgattgcccgggacaccggcatcaagcagcaactgcgggatcagggcatccgg
acgcagagtttcaatgccgccctgctgttcgagccctggaccgtggccaagcaggacggc
accccctacaaggtgttcacccccttctggaaggcctgcctgggtctgggcgtgccggtg
gacgtgacgcctgcgcccgaacgcatccagggtcctgcacagctgccgccgggcgagacg
ctgaaatccctgggcctgctgcccgacatcgactgggccgcgggctttaccgaactgtgg
cagcccggcgaggccggcgccctggcacgccttgcggagttcatggacgaggcggtggcg
gactacgacgagatgcgcaaccgccccgaccgggacggcagttcacgtctctccccctac
ctgcacttcggtgagatcggcccccgccaggcggccgccgcctgccaggtagccaaggac
cggcatggcggcaaggcggcccaccagggcatcgacagcttcctgcgcgagatcggctgg
cgggagttcgcccatcacctgctctaccatttcccccggaccagcgacgagcccctggac
ccgcgctttcgcaagctgccctggcgcgaactggatgaagagacgctgcgggcctggcag
cggggccgcaccggcatccccctggtggacgccgccatgcgcgccctgtgggccaccggc
tggatgcacaaccgggtgcgcatgatcgtcgcctccctgctcaccaagaacctgggcgcc
cactggctcaccggggcccgctggttctgggacaccctggtggacgcggacctggccggc
aacaccctgggctggcagtggaccgccggctgcggcgccgacgccgccccctacttccgg
gtgttcaatcccgtgctccagggcgagcgcttcgaccccaacggcgactacctgcgccag
tgggtgccggaactggcgaagctgccggcgaaatacatccacaggccctgggaggcgccc
gaggcgatcctcaaggcggcgggtgtgcgcctgggcggcaactatccacggcccatcgtg
gatctcgcggaaagccgccggcaggcgctggagatgtgggaggtgattaaaggaacgaag
gatgaaggatga
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