Thioalkalivibrio sulfidiphilus: Tgr7_1759
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Entry
Tgr7_1759 CDS
T00840
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tgr7_1759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1759
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tgr7_1759
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tgr7_1759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ACL72841
UniProt:
B8GSD7
LinkDB
All DBs
Position
complement(1860887..1862911)
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AA seq
674 aa
AA seq
DB search
MTQQFTLKTGYTPAGDQPAAIEKLVEGLEDGLAHQVLLGVTGSGKTFTIANVIQRTQRPT
IILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINDHIE
QMRLSATRALLERRDAIIVASVSAIYGLGDVNAYMQMVLHLKRGDRVDQRDILRRLAELQ
YTRNDMELRRGTYRVRGEVIDIHPAESEREAVRIELFDDEIEQLSYFDPLTGEILKRVAR
LTVYPKTHYVTPRETILGAVEQIKVELRERLEQLRSVEKLVEAQRLEQRTIFDIEMMLEV
GYCSGIENYSRYLSGRKPGEPPPCFFDYLPKDALLVVDESHVTVPQLGGMYRGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEALSPQAIYVSATPGPYELEHAGQVVEQVVRPTGLVDP
EVEVRPATHQVDDVLSEIRARVAVNQRVLITTLTKRMAEDLTEYLHEHDVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNVHGKAILYADRITGSMARAMEETERRREKQIAHNLEHGITPRSVEKRIADIMEGAY
AGGSMASPKRFAKVAEEEIAYGLPPEKAVKEIARLESQMYEHARNLEFEEAALLRDRIEH
LRKGSLGMPETANG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaatttaccctcaagaccggctacaccccggccggtgaccagcccgccgcc
atcgaaaagctggtggaaggcctggaagacggcctcgcccaccaggtcctgctcggcgtg
accggctccggcaagaccttcaccatcgccaacgtcatccagcgcacccagcggcccacc
atcatcctggcgcccaacaagaccctggccgcgcagctgtacggggagatgaaggagttc
ttcccggacaacgcggtggagtacttcgtctcctactacgactactaccagccggaggcc
tacgtgccggcctcggacaccttcatcgagaaggacgcctccatcaacgatcacatcgag
cagatgcgcctgtccgccacccgggccctgctggagcggcgcgacgccatcatcgtggcc
agcgtctcggccatctacggcctgggggacgtgaacgcctacatgcagatggtgctgcac
ctgaagcgcggcgaccgggtggaccagcgggacatcctgcgccgcctggcggagctgcag
tacacccgcaacgacatggagctgcgccggggcacctaccgggtgcgcggcgaggtgatc
gatatccacccggcggaatccgagcgcgaggcggtgcgcatcgagctgttcgacgacgag
atcgagcagctgtcctatttcgacccgctgaccggcgagatcctcaagcgcgtcgccagg
ctcacggtctaccccaagacccactacgtcaccccccgggagaccatcctgggcgccgtg
gagcagatcaaggtggagctgcgcgagcgcctggaacagctgcgctcggtggagaagctg
gtggaggcccagcgcctggagcagcgcaccatcttcgacatcgagatgatgctggaggtg
ggctactgctcgggcatcgagaactactcccgctacctctccggccgcaagcccggcgag
cccccgccgtgcttcttcgactacctgcccaaggacgccctgctggtggtggacgagagc
cacgtgaccgtcccccagctgggcggcatgtaccggggcgaccgctcccgcaaggagacc
ctggtggaatacggcttccgcctgccctcggccctggacaaccgccccctgcgcttcgag
gaattcgaggccctctcgccccaggccatctacgtctccgccaccccggggccctacgaa
ctggagcacgcgggccaggtggtggagcaggtggtgcgccccaccggcctggtggacccg
gaggtggaggtgcgcccggccacccaccaggtggacgacgtgctctcggagatccgcgcc
cgggtggcggtcaaccagcgggtgctgatcaccaccctgaccaagcgcatggccgaggac
ctgaccgaatacctgcacgagcacgacgtgcgtgtgcgctacctgcactcggacatcgat
accgtggagcgggttgagatcatccgcgacctgcgcctgggggagttcgacgtgctggtg
ggcatcaacctgctgcgcgagggcctggacatgcccgaggtctccctggtggccatcctg
gacgcggacaaggagggcttcctgcgttccgaccgttccctgatccagaccatcggacgc
gccgcccgcaacgtgcacggcaaggccatcctgtatgccgaccggatcaccggctccatg
gcccgggccatggaggagaccgagcgacgccgggagaagcagatcgcccacaacctggag
cacggcatcacgcccaggagcgtggaaaaacgcatcgccgacatcatggaaggcgcctac
gcgggtggctcgatggcctcgccaaagcgcttcgctaaggtggccgaggaggagattgcc
tacggcctgccgccggagaaggcggtcaaggagatcgcccggctggaaagccagatgtac
gagcatgcccgcaacctggagttcgaggaggccgcgctcctgcgcgaccgcatcgagcac
ctgcgcaagggctccctgggcatgccggagaccgcgaacggatga
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