Thioalkalivibrio sulfidiphilus: Tgr7_1908
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Entry
Tgr7_1908 CDS
T00840
Name
(GenBank) conserved hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tgr7_1908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1908
Enzymes [BR:
tgr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Tgr7_1908
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tgr7_1908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACL72989
UniProt:
B8GSX4
LinkDB
All DBs
Position
complement(2034451..2035107)
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AA seq
218 aa
AA seq
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METHFDPHCTRCPRLSGFLADLRQKHPGYHNAPVAPFGDPEARLLIVGLAPGMHGANASG
RPFTGDYAGILLYETLHRFGFASRPESVSADDGLVLSDCRITNAVKCLPPANKPETGEVV
CCNDYLAVELRGLPRDAVVLALGTIAHNAVLRALGIKASAHRFGHGAEHELDGLTLIDSY
HCSRYNTQTRRLTPEMFQAVFARIRERLPEALARQRRA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccacttcgatccccactgcacccgctgcccgcgcctgagcgggtttctggcc
gacctgcgccagaaacaccccgggtatcacaatgcccccgtggcgcctttcggtgatccc
gaagcccggctgctgatcgttggcctggccccgggcatgcacggcgccaacgcctcggga
cggcccttcaccggcgactacgccggcatcctgctctacgagaccctgcaccgcttcggc
tttgccagtcgcccggaatcggtgtccgccgacgacgggctggtgctcagtgattgccgc
atcaccaacgcggtgaagtgcctgccgccggccaacaagccggagaccggcgaggtggtg
tgctgcaacgattacctggccgtggaactcaggggcctgccccgggacgcggtggtcctg
gccctgggcaccatcgcccacaatgccgtcctgcgcgccctggggatcaaggccagcgcg
caccgcttcggccatggcgccgaacatgaactcgacggcctgaccctgatcgattcctac
cactgcagccgctacaacacccagacccggcgcctgacccccgagatgttccaggcggtg
ttcgcccgcatccgcgagcggctgcccgaagcgctggcccggcagcggcgcgcctga
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integrated database retrieval system