Thioalkalivibrio sulfidiphilus: Tgr7_1931
Help
Entry
Tgr7_1931 CDS
T00840
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tgr7_1931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgr03019
]
Tgr7_1931
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_1931
Enzymes [BR:
tgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tgr7_1931
Messenger RNA biogenesis [BR:
tgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tgr7_1931
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tgr7_1931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HTH_40
ResIII
SaeA_1st
HHH
Motif
Other DBs
NCBI-ProteinID:
ACL73012
UniProt:
B8GSZ7
LinkDB
All DBs
Position
complement(2052493..2054628)
Genome browser
AA seq
711 aa
AA seq
DB search
MDTARQVLRDTFGYPDFRPTQGEIVEHLVAGNEALVLMPTGGGKSLCYQIPSLVRSGTGI
VVSPLIALMQDQVDALRQVGVRAAFLNSSLDARTAREVEQALLAGELDLLYVAPERLMTE
RMMDLLTRSRLALFAIDEAHCVSQWGHNFRPEYLKLSALHERFPEVPRVALTATADAPTR
KEIAERLGLTEARHFISGFDRPNIRYRVTQKHAGTRNELLRFIKDNHPGEAGIVYCLSRK
KVDDTAQWLEGKGLTALPYHAGLAQEVRQDHQSRFLREEGVIVVATIAFGMGIDKPNVRF
VAHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIMLRQMLEASEAEETHKRIERA
RLEAMLGYCELTTCRRQRLLEYFGERLPEPCGNCDTCLEPPETWDATVAAQKALSCVHRT
GQRFGVNHVLDVLLGKDSERIRQLGHDKLSTYGIGKELDAHQWRAVFRQLVAAGLLTVDA
EGFGALKLTEACRPVLRGEQEVWLRKDARPPRGGGRKERVSKRVSTGPVDGPGEALFDAL
RALRRSLADAQDVPAYVIFNDATLREMVAVQPRTLDELAEVSGVGQRKLSQYGEDFLSVI
LEYAGSGDDSGVSDTVLETLSLFRLGFDAEAIAARRGLTTDTVYNHLARSVQAGEIPLRE
AVGLSDAELKQVEEAFDAHFDPAAPALRPVFDALDGVYSYGVLRCVQAGRG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcaagacaggtcctgcgggacaccttcggctaccccgattttcgccccacc
cagggagagatcgtcgaacacctggtggcgggcaatgaggccctggtcctcatgcccacc
ggcggcggcaagtcgctgtgctaccagatcccctccctggtgcggtctggcaccggcatc
gtggtctcgccgctgatcgccctgatgcaggaccaggtggacgcactccggcaggtgggc
gtgcgtgccgcgttcctgaactcaagcctcgatgcccgcaccgcccgggaggtggaacag
gccctgctggccggggagctggatctcctctacgtggcccccgaacgcctcatgaccgag
cgcatgatggacctgctcacgcgcagccggctggccctgttcgccatcgacgaggcccac
tgcgtgtcgcaatggggccacaacttccgccccgaatacctcaagctctccgccctgcac
gagcgttttcccgaggtgccccgggtggcactcaccgccaccgctgacgcacccacccgc
aaggagatcgccgagcgcctggggctcaccgaggcccggcatttcatcagcggcttcgac
cggcccaacatccgttaccgggtgacccagaaacacgccggcacccgcaacgagctgctg
cgtttcatcaaggacaatcacccgggcgaggcaggcatcgtctactgcctgtcgcgcaag
aaggtggacgacacggcccaatggctggagggcaagggcctcaccgcgctgccctatcac
gccggtctggcccaggaggtccgccaggaccaccagtcccgcttcctgcgcgaggagggg
gtgatcgtggtcgccaccatcgccttcggcatgggcatcgacaagcccaacgtgcgcttc
gtggcgcacctggacctgcccaagagcctggaggcctattaccaggagaccggccgtgcc
ggccgcgacggcctgcccgcggatgcctggatggcctacggcctgcaggacgtgatcatg
ttgcgccagatgctggaggcctccgaggcggaggagacccacaagcgcatcgagcgggcg
cgcctggaggccatgctgggttactgcgagctgaccacctgccgccgccagcgtctgctg
gagtacttcggcgagcgcctgcccgagccctgcggcaactgcgacacctgcctggagccg
cccgagacctgggatgccaccgtggcagcccagaaggcgctctcctgtgtgcaccgcacc
ggccagcgcttcggcgtgaaccacgtgctggacgtgctgctgggcaaggacagcgagcgc
atccggcaactgggccacgacaagctgtccacctacggcatcggcaaggaactggacgcc
caccagtggcgcgctgtgttccgccagctggtggccgccggcctgctcaccgtggacgcc
gaaggtttcggcgccctgaaactcaccgaggcctgccgccccgtgctgcgcggcgaacag
gaagtctggctgcgcaaggatgcccgcccgccccggggcgggggtcgcaaagagcgggtc
agcaagcgggtctccacgggccccgtggacggacccggcgaggccctgttcgacgccctg
cgcgccctgcgccgcagtctcgccgatgcccaggacgtgcccgcctacgtgatcttcaac
gacgccaccctgcgcgagatggtggcggtccagccccgcaccctggacgagctggcggag
gtctccggtgtcggccagcgcaagctttcccagtacggcgaggatttcctgtcggtgatc
ctggagtatgccgggtccggggatgacagcggtgtcagcgacacggtgctggagaccctg
tccctgttccgcctgggcttcgacgccgaggccatcgccgcccggcgcgggctgaccacg
gacaccgtctacaaccacctggcccgctcggtgcaggccggggagattcctttgcgcgag
gcggtgggcttgtccgatgccgagctcaagcaggtggaagaggccttcgatgcccatttc
gatccggcggcgccggcgcttcggccggtgtttgatgcgctggatggggtgtattcgtat
ggggtgttgcggtgtgtgcaggcggggagggggtag
DBGET
integrated database retrieval system
