Thioalkalivibrio sulfidiphilus: Tgr7_2299
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Entry
Tgr7_2299 CDS
T00840
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tgr7_2299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgr03021
]
Tgr7_2299
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_2299
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tgr7_2299
Transcription machinery [BR:
tgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tgr7_2299
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tgr7_2299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Ponericin
Motif
Other DBs
NCBI-ProteinID:
ACL73379
UniProt:
B8GV33
LinkDB
All DBs
Position
complement(2431026..2432030)
Genome browser
AA seq
334 aa
AA seq
DB search
MQTKVNELLKPRHIEVTSVSDRQAKVVLEPLERGFGHTLGNALRRILLSSIPGAAVVEAE
IEGVLHEYTSIEGVQEDVVDILLNLKGIALRMHNRDEATLTLKKKGPGVVTAGDITLDHD
VEIVNPEHVIAHLTKNGELSMSLKLGRGRGYQPVTARRSSESEDRPIGRLMLDASFSPIR
RVAYKVESARVEQRTDMDRLVIELETNGTVEADDAIRQAAGILQSQLAAFVELQGDESTV
TESKQMEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASHGLSMGMRLENWPPPGLKDQDKKASG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaaagtcaacgaactcctcaagcctcgccacatcgaggtcaccagtgtcagc
gatcggcaggccaaggtggtgctcgagcctctggagcgcggtttcggccataccctgggc
aatgccctgcgccgtatcctgctgtcttccattccgggcgccgcggtggtggaagcggag
atcgagggtgtgctccacgagtacacctccatcgagggtgtgcaggaggacgtggtcgat
atcctgctgaacctcaagggcatcgccctgcgcatgcacaaccgcgatgaggccaccctg
accctgaagaagaagggcccgggcgtggtcaccgccggcgacatcaccctggatcatgac
gtggaaatcgtcaatccggagcacgtgatcgcccacctgaccaagaacggcgagctgtcc
atgagcctgaagctgggccgcggccgtggctaccagcccgtgaccgcccgtcgcagctcc
gagtccgaggaccgtcccatcggtcgcctgatgctggatgccagcttcagccccatccgt
cgcgtggcctacaaggtcgagagcgcccgtgtggagcagcgtaccgacatggaccgtctg
gtcatcgagctggagaccaacggcaccgtggaggccgatgacgccatccgccaggccgcc
ggcatcctgcagagccagctggccgcgtttgtcgaactgcagggcgacgagagcaccgtc
accgagagcaagcagatggagatcgaccccatcctgctgcgtcccgtagatgacctggag
ctgaccgtgcgctccgccaactgcctgaaggccgagaacatctactacatcggtgacctg
atccagcgcaccgaggtggagctgctcaagaccccgaatctgggcaagaagtccctgacc
gagatcaaggacgtgctggcctcccatggcctttccatgggcatgcgccttgagaactgg
cccccgccgggtctcaaggatcaggacaagaaggcctccggctga
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