Thioalkalivibrio sulfidiphilus: Tgr7_3057
Help
Entry
Tgr7_3057 CDS
T00840
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr00061
Fatty acid biosynthesis
tgr00071
Fatty acid degradation
tgr01100
Metabolic pathways
tgr01212
Fatty acid metabolism
tgr02024
Quorum sensing
tgr04146
Peroxisome
Module
tgr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Tgr7_3057
00071 Fatty acid degradation
Tgr7_3057
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Tgr7_3057
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tgr7_3057
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tgr01004
]
Tgr7_3057
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgr04147
]
Tgr7_3057
Enzymes [BR:
tgr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Tgr7_3057
Lipid biosynthesis proteins [BR:
tgr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Tgr7_3057
Exosome [BR:
tgr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Tgr7_3057
Exosomal proteins of breast cancer cells
Tgr7_3057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_4
Motif
Other DBs
NCBI-ProteinID:
ACL74126
UniProt:
B8GPX9
LinkDB
All DBs
Position
3202986..3204803
Genome browser
AA seq
605 aa
AA seq
DB search
MSDPAHVITPLEAGSLSGLFIERVRRSPNALAYRQFDIGKNAWVESTWSEVATEVGRWQQ
AMLKEGLKPGDRVAIMLRNCREWVVFDQACLGLGLITVPLYTDDRPENIAYIVREADVKL
MVVEGRLQWKKILEVRDRLEGLRRIISVNTIEPDDKPDDPRLDSLSDWLFGLKGELQAHA
LEPDELATIVYTSGTTGKPKGVMLSHRNILFNAHASSRCADLNEQDLFLSFLPLSHTLER
TAGYYMPMMVGAAVAYARSIQTLADDLATVRPTVLISVPRIYERVYGRINAGLKEKSLLA
RKLFMTTVDVGWRRFEHSQGRAGWHPKLLLWPLLEKLVASKVLARLGGRLRYAVCGGAPL
PPPIARFFIGLGLPVFHGYGMTESSPVVSVNRPDDNVPASIGKPLPGVEVKIGDKDELLT
RSPSVMLGYWNNEEATRATIDSEGWLHSGDKARMDETGHLYITGRIKEIIVLGNGEKVPP
ADMEMAIALDPLFDQVMVIGEGRPALAAIVVLNPEEWAALAKELDLDPESEADLNGRFLE
KTLRTRIARQLHEFPGYAQVRKLIVTLEPWTVDDGLLTPTLKMKRARILERYKDQVEALY
EGYTE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcctgcccacgtgatcaccccgttggaggccggttcactgtccggccttttc
attgaacgggtccgccgttcccccaacgcgttggcctatcgccagtttgacatcggcaag
aacgcctgggtggagagcacctggagcgaggtggccaccgaggtgggccgatggcagcag
gccatgctcaaggagggcctcaagcccggcgaccgggtggcgatcatgctgcgcaactgc
cgggaatgggtggtgttcgaccaggcctgtctggggctgggcctgatcaccgtgcccctg
tacaccgacgaccgccccgagaacatcgcctacatcgtgcgcgaggccgatgtgaagctg
atggtggtagagggccgcctgcagtggaagaagatcctggaggtgcgcgaccgcctcgaa
ggtctcaggcgcatcatctccgtgaacaccatcgagccggatgacaagcccgacgacccg
cgcctggattccctgtccgactggctgttcggcctcaagggcgagctgcaggcccatgcc
ctggagcccgacgagctggctaccatcgtctatacctcgggcaccaccggcaagcccaag
ggcgtgatgctcagtcaccgcaacatcctgttcaacgcccatgcctccagccgctgcgcg
gatctcaacgaacaggacctgttcctgtccttcctgcccctgtcccacaccctggagcgc
accgcgggctactacatgcccatgatggtgggcgccgccgtggcctacgcccgttccatc
cagacactggccgatgatctggccaccgtgcggcccacggtgctgatctccgtgccgcgc
atctacgagcgggtctacggacgtatcaatgccgggctgaaggagaagtctctcttggcc
cgcaagctgttcatgaccaccgtggatgtgggctggcgtcgcttcgagcacagccagggc
cgcgccggctggcatcccaagctgctgctctggccgctgctggagaagctggtggccagc
aaggtgctggcgcgtctgggcgggcgcctgcgctacgccgtgtgcggcggtgcccccctg
ccgccgcccattgcgcgattcttcatcggcctgggtctgcccgtgttccacggttacggc
atgaccgagtcgagcccggtggtgagcgtaaatcgtcccgacgacaacgtcccggcgagc
atcggcaaacccctgcccggtgtggaggtgaagatcggtgacaaggacgagctgctgacc
cgcagtccttccgtgatgctcggctactggaacaacgaggaggccacccgcgcgaccatc
gacagcgagggctggctgcacagcggcgacaaggcgcgcatggacgagaccgggcacctc
tacatcaccgggcgcatcaaggagatcatcgtgctgggcaatggtgagaaggtgccgccc
gccgacatggagatggccatcgccctggacccgctgttcgaccaggtcatggtcatcggc
gagggccggcccgcgctcgccgccatcgtggtgctcaatcccgaggaatgggccgccctg
gcaaaggaactggacctggatcccgagagcgaggcggatctaaacggccgcttcctggag
aagaccctgcgtacccgcatcgccaggcagctccatgaatttcccggctacgcccaggtg
cgcaagctgatcgtcaccctggagccctggacggtggacgacggcctgctcacgcccacc
ctcaagatgaagcgcgcacgcatcctcgagcgctacaaggaccaggtcgaggccctctac
gaaggctacaccgagtga
DBGET
integrated database retrieval system
