Tinamus guttatus (white-throated tinamou): 104564578
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Entry
104564578 CDS
T08560
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104564578 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
104564578 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104564578 (LSM7)
03041 Spliceosome [BR:
tgt03041
]
104564578 (LSM7)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104564578 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
104564578 (LSM7)
Spliceosome [BR:
tgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104564578 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104564578
NCBI-ProteinID:
XP_010209521
LinkDB
All DBs
Position
Unknown
AA seq
140 aa
AA seq
DB search
MDRRSLRTVTAHLTACSLPKAYNLAAAMQPRSGTPSVLQEREKKKKESILDLSKYIDKTI
RVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVL
ICPQDGMEAIPNPFIQQQDG
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcgaagcctgcgcaccgtcaccgcacacctgacagcctgctcgctcccgaag
gcgtacaacctcgctgctgccatgcaaccccgttcgggaacaccgtctgtgctccaggaa
cgcgagaagaagaagaaggagagcatcttggatctctccaagtacatcgacaagacgatc
cgcgtgaagttccagggcggccgcgaagctagcggagtcttgaaaggatttgacccactt
ctgaaccttgtgcttgatggtaccattgagtacatgagagatccagatgatcaatacaaa
ttaacagaagacacgcgccagctggggctggtggtctgcagaggaacttctgtggttctc
atctgtccacaggatggcatggaggccattccaaaccctttcattcagcagcaggatggc
taa
DBGET
integrated database retrieval system
