Tinamus guttatus (white-throated tinamou): 104564813
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Entry
104564813 CDS
T08560
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104564813 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104564813 (DDX3X)
03041 Spliceosome [BR:
tgt03041
]
104564813 (DDX3X)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104564813 (DDX3X)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104564813 (DDX3X)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104564813 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
104564813 (DDX3X)
Spliceosome [BR:
tgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104564813 (DDX3X)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104564813 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104564813
NCBI-ProteinID:
XP_010209754
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MESSIPVRSPAGISAPTPSQSLSIHAIPLRFSTCLSLPCDQQKSVAGQGPEPTVSSNGRG
IRQAGRPAHGSSAAGSGPGSTTRVRHGPGVAQQFSGLDLNSSDSQSEGSSTSKGRYIPPH
LRNREASKQGFDSGGWSSSRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGGD
YDRSGFGRFDRGGGSSRWSDKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVE
ATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSG
KTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKF
AYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEA
DRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG
STSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACT
SIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEHVHRI
GRTGRVGDLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRS
KSSRFSGGFGARDYRTSSGSSSSSFSSSRPPSSRSGGSSSRGFGGGGYGGFYNSDGYGGN
YNSQGVDWWGN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagagctctatccctgtgcgttctcctgctggcatctctgcacccacaccttctcag
tcgctctccattcacgccattccgttacggttttctacatgcctttctctcccttgtgat
cagcagaaatccgtcgccggtcagggcccagagccaacagtgagcagcaatggcagggga
atcaggcaggccgggcggccggcccacggctcctcagcggctggatcgggcccagggagc
acaaccagggtcaggcacggccctggggtagcccagcagttttctggtctagacttgaac
tcctcagactctcagagcgaaggaagctctacaagcaaaggccgatacattcctcctcac
ttacggaacagggaagcttcaaaacagggttttgacagtggtggctggagctctagcaga
gacaaggatgcatacagcagctttggtgcgcgatctgaccgtggagcaaaatccagcttc
tttgaccgtggaaatgggtcaagaggaggaaggtatgaagagcgtggaagaggtggtgac
tatgacaggagtggctttggaagatttgatcgcggtggtggaagtagccgctggtctgac
aaatcagatgaagatgactggtcaaagcctcttcccccaagtgaacgtctggaacaagag
ctcttttcaggaagcaatactggcattaactttgagaaatatgatgacatccctgttgaa
gcaacaggcagcaactgtcctccacatattgaaagcttcagcgatgttgacatgggggaa
attattatgggaaacattgagctcacacgatacacccgtcctactccagtccaaaaacat
gcaataccaattattaaggaaaagagagacttgatggcctgtgctcagacaggttctggg
aaaacggctgcatttcttctaccaatactgagccagatctatgcagatggccctggtgat
gccttgagagctatgaaggagaatgggaggtatggacgtcgtaagcaatatccaatctca
ttggtcttggctccaactagagaactggctgtgcagatctatgaggaagccaggaagttt
gcgtaccgttccagagttcgtccctgcgtggtgtatggtggcgcagacattggtcagcag
atacgtgacttggaacgtggatgtcacttgcttgtggcaactccaggacgactggttgat
atgatggagaggggaaagattggactggacttctgcaagtacctagtgctagatgaagct
gacagaatgcttgatatggggtttgaacctcaaattcgtcgaattgttgaacaagatact
atgccaccaaaaggggtccgtcataccatgatgttcagtgctactttccccaaggaaatc
cagatgcttgctcgtgactttcttgatgaatacatcttcctggctgtgggccgagtgggt
tctacctctgagaacatcacacagaaagtggtgtgggtggaagagtcagacaagcggtcg
ttcctgctcgatctgctcaatgccacaggcaaagattccctgactctggtgtttgtggaa
accaaaaagggtgcggatgctttggaggacttcctctaccatgaagggtacgcctgtacc
agcatccatggggatcgctcgcagagagacagagaggaagcgctgcaccagttccgttcg
ggcaagagccccattcttgttgccacagccgtagcagcaagaggactggatatctcaaat
gtaaagcacgtcataaactttgacttgccaagtgatattgaagagcatgtacaccgtatt
ggtcgtacaggccgtgtaggggaccttggccttgccacctcattcttcaatgagaggaat
atcaacatcaccaaggacttgcttgatctccttgtggaagctaagcaagaagtaccatct
tggctggagaacatggcttatgagcagcatcacaaggggggtggcagccgggggcggtca
aagagcagtaggttcagcggaggatttggtgccagagactatcgcacaagtagtggttct
agcagcagtagctttagcagtagtcggccacccagcagccgcagcggaggaagtagcagc
agagggtttggaggtggtggctatggaggcttctacaacagcgatggatatggaggaaac
tacaactcccagggggttgactggtggggcaactga
DBGET
integrated database retrieval system
