Tinamus guttatus (white-throated tinamou): 104565019
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Entry
104565019 CDS
T08560
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104565019 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104565019 (MSH6)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104565019 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
104565019
NCBI-ProteinID:
XP_010209974
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MFYSSKPEIKRAMVLADDAMSKDKTKRLELAVCNEPSDTEEEEEEMEQMSESVSGNSDGC
NSEEDVKTNKRAAYSGRGTVKAKRRRLLDSDSDHDDSDVEFKPDVKEAASSEEVSSGVDE
NESTDTEMDTESIAESPIKVSSKRKRRDAGKPAKRTSLGNDRSETPKIAAVVSSEAKSKL
TSFAAPENFESQANACSGGNGGFAVWEHEKLDWLQEGKRKDAHRRRQGDPDYDPCSLYVP
EDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHS
GFPETAFGRFSDVLVQKSYKVARVEQTETPEMMEVRCKSMSHPTKFDRVIRREICRIITK
GTQTYSVLDSDPSENHNKYLLSIKEKEDSSGHRVFGACFVDTSVGKFYIGQFSDDRHCSR
FRTLVAHYTPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEE
YFKEKQNSDNGCSLPSVIKSMTSESDSLGLTPGENSELALSALGGCIFYLKKCLIDQELL
SLGNFEEYVPVDMDIAKTTTSSSVFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLER
IDSCCTPFGKRLLKQWLCTPLCNPKSINDRLDAVEDLLAVPDKMSEVSEDLKKLPDLERL
LSKIHSIGSPLKSQSHPDSRAIFYEEVKYSKKKIADFLSALEGFKVMNKIVDAMEETASN
FKSRILKQLVTRKAKNPEGRFPDLNAELKRWDTAFDHNQARKTGVITPKSGFDPDYDKAL
QDIKAVEEDLNEYLNKQRKLLGFKSMLYWGAGKNRYQMEIPESAISRNLPEEYELKSTRK
GYKRYWTKEIERMLAALVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECISVLDVLM
SLANYSQGGDGPLCRPVILLPVDSSPPFLELKSSRHPCITKTYFGDDFIPNDIVIGCKDE
HSSSEASCVLVTGPNMGGKSTLMRQAGLLAIMAQLGCYIPAEGCRLTPIDRVFTRLGASD
RIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKC
RTLFSTHYHSLVEDHSHCAAVRLGHMACMVENESEEDPSQETITFLYKFIEGVCPKSYGF
NAARLANIPEEVVQKGHRKAKEFEKTTISLRIFRYLCLVVDDATSDTRALQKLTTLISHL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttacagctcaaagcctgaaattaaaagagcaatggtgctggcagatgatgcaatg
agtaaagataaaactaagcggcttgagcttgcagtctgcaacgaaccttcagatacagag
gaggaggaggaggaaatggagcagatgagtgaaagtgtttcaggcaacagtgatggctgc
aacagcgaggaggatgtgaagaccaataagcgagcagcgtatagtgggagaggtaccgtg
aaagccaaaaggaggaggctgctggattctgacagtgatcatgatgattctgatgttgag
ttcaagcccgatgtgaaagaagcagcaagcagtgaagaagttagtagtggggtggatgaa
aatgagtctactgacacagagatggacacagagagcattgcagaaagtcccattaaagtc
tcttccaaacgaaagaggagagacgcaggcaagcctgctaaaaggaccagcttgggaaat
gaccgttctgaaacacccaaaatagcagcagtggtctcttcagaagctaagtccaagcta
acttcttttgcagcacctgaaaactttgaatctcaggcaaatgcttgcagtggaggaaat
ggtggctttgcagtgtgggagcatgaaaagctggactggctgcaggaagggaaaaggaag
gatgcgcacaggaggcgacagggtgatcctgactatgacccttgcagtctgtatgtacct
gaggactatcttaacaagtgtaccccaggaatgcggaggtggtggcagctgaaaagccaa
aactttgatgctgtaatttgctacaaggttggaaaattctatgagttgtatcatatggat
gcggtcacgggtgtaaatgagttgggcctgatattcatgaaaggcacttgggcccattca
ggtttcccagaaactgcatttggcaggttttcagatgttctcgtacagaagagctacaag
gtagcccgtgtggagcaaacagaaacccccgagatgatggaagtgcgctgtaaatccatg
tctcacccaacaaaattcgacagggtgatacgcagagagatctgtcgaatcattactaaa
ggaactcagacttacagtgttctggactctgacccatctgagaaccataacaaatacctt
ctgagcatcaaagaaaaagaagactcctccggacatcgtgtctttggagcttgttttgtt
gacacctcagtagggaagttctacatcgggcagttctccgatgaccggcactgctcaagg
ttccgaactttggtcgctcactacactcctgtgcaggtgctctttgagaagggcaacctt
tctgtggacacacagaagatcctgaaaggctcacttgtttcttgcattcaggaagggttg
atttctgggtcccagttctggaatgcatctaaaacactaaaggttctccttgaagaagaa
tatttcaaggagaaacagaactctgataacggatgttctctgccgtctgttatcaaatct
atgacttccgagagtgattcgctggggttaactcctggtgaaaacagtgaactagctctg
tcagctctgggagggtgtatcttctatctcaaaaaatgcttaattgatcaggagctgtta
tcgttggggaactttgaggaatatgtccctgtggatatggatatcgcaaagactaccact
tcaagtagtgtttttgccaaaactgaccagcggatggtgctggatggagtcaccctgatg
aacttggaagtcctacagaacggaactaacggtaccacagaagggactttgctagaaagg
attgactcttgctgcacgccgtttggaaagcggctcctgaagcagtggctctgcactccc
ctctgtaaccctaaatccatcaacgatcgtttagatgctgttgaagaccttctggcggtg
cctgataaaatgtctgaagttagtgaggacctgaagaaacttcctgaccttgaaagactc
ctcagcaaaattcacagtattggatcgccacttaaaagtcagagccatcctgacagcaga
gccatcttttatgaagaagttaagtatagcaaaaaaaaaattgctgacttcttgtctgca
ctggaagggtttaaagtaatgaataaaattgtagatgccatggaagaaactgccagcaac
ttcaaatctagaatacttaagcagctagtcacccgcaaagccaaaaatccagagggccgt
tttcctgatttaaatgcagaacttaaaaggtgggatactgcttttgatcataaccaggct
cggaagacaggagtgatcactccaaagtcaggctttgaccctgattacgataaagcacta
caggatattaaagctgtagaggaagatcttaatgagtacctaaataaacagcgcaaactc
cttggattcaaatccatgctgtattggggggcaggcaagaaccgataccaaatggaaata
cccgaaagtgcaatctcgcgtaatttacccgaggagtatgagctgaagtcgacacggaag
gggtacaagcgttactggaccaaggagatcgagaggatgctggccgcgctggttaacgcc
gaggagcggagggatgcggctcttaaggactgcatgaggcgcctgttttacaactttgat
aaaaacagcaaggactggcagactgctgttgaatgcatctctgtgttagatgtcttgatg
tcccttgcaaactatagtcaaggtggtgatggacccctgtgccgacctgtaattctgctg
cctgtggatagttctcctccattcctggaacttaagagttcacgccatccatgcattaca
aagacttattttggagatgattttattcctaatgacatcgtgataggctgcaaagatgag
cacagcagtagtgaagcttcctgcgtgttagtgactggcccaaacatgggtggcaaatct
acgctcatgagacaggctggtctcttggccataatggcccagctgggatgctacatacct
gctgagggctgcagacttacacctatcgacagagtattcacaaggctgggtgcctcagac
agaattatgtcaggtgaaagtaccttctttgttgagttgagcgagacttccagtatactc
cagcatgcaacagagcattcccttgttcttgtggatgaactaggtcgaggcacagctact
tttgatggaacagctatagcaagtgcagttgttaaagagcttgcagagaaaatcaagtgt
cgaactctgttctccacccactaccactcgctggtagaggatcattcacactgtgctgcc
gtgcgccttggacacatggcatgtatggttgaaaatgagagtgaagaagatccaagccag
gaaacaattacattcctgtacaaattcattgaaggagtatgtcccaaaagctatggcttc
aatgcagcaagacttgctaatattccagaggaggttgttcagaaggggcacagaaaagca
aaagagttcgaaaaaacaacaatttcgctgagaatatttaggtatctctgcttggtggtg
gatgatgcaacaagtgacacaagggcccttcagaaacttaccactctgatcagtcacctc
tag
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integrated database retrieval system
