Tinamus guttatus (white-throated tinamou): 104565027
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Entry
104565027 CDS
T08560
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104565027 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104565027 (MSH2)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104565027 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
SH2
Motif
Other DBs
NCBI-GeneID:
104565027
NCBI-ProteinID:
XP_010209981
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MEQDGDVGQDRDLGLGQNKVSLVLALKDRCLFVVRERNQKLESVVLSKMNFESFVRDLLL
VRHYRVEVYKNKAGSKSTKENDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLST
TDGQRVVGVGYVDTTLRKLSICEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLR
QVIQRGGILITDRKKAEFTTKDIVQDLNRLLKSKKEEQMNSAALPEMEKQVAISSLSAII
KFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQNSLENANTAQSLAGLLNKCR
TPQGQRLVNQWIKQPLMDRNRIEERLDLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKF
QRQAATLQDCYRMYQAINQLPNVVQALEKHEGDHQMLLLAVFITPLNDINSDFSKFLEMI
ETTLDMDKVENHEFLVKASFDPNLTELREKMNELEENMQSVLKSAAKELGLEAGKSIKLE
SNSQFGHHFRITCKEEKVLRNNSKYKIIDTQKNGVKFTNSKLSSINEEYIKNREEYEEAQ
DAIVKEIINIASGYAEPIQTMNDVIAQLDALVSFAHVSNGAPVPYVRPVILEKGQGRIVL
KGSRHPCIEVQDDVAFIPNDVMFEKDNQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCF
VPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMFETASILRTASENSLIIIDELGRGT
STYDGFGLAWAISEYIATKICAFCMFATHFHELTALADQVATVNNLHVTALTSDDTLTML
YRVKEGVCDQSFGIHVAELAAFPKHVIENAREKALELEEFQNIGKSKECEGEPPVKKPYR
EREEGEKIIQDFLCQLKALPLADMSEEDIKTKLKQLRNEVLAKNNSFVNEIISRTKVTS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggatggagatgtgggacaggacagagacttgggcctgggccaaaataaggtg
tctctggtgctagctcttaaagacaggtgcctgtttgtggtgagagaacgaaatcagaaa
ctggagagtgttgtgcttagtaaaatgaattttgaatcttttgtgagagatttgcttctg
gttcgtcattacagagttgaagtttacaagaacaaagcagggagcaaatctaccaaagaa
aacgactggtatctggcatacaagggttctccaggaaatcttgcccagtttgaggaagtt
ctctttgccaacaatgatatgtcaatggccattggagttgtgggcgtgaagctgtctact
actgatggacaaagagtagttggagtggggtatgtggatactacactgagaaaactgagc
atctgtgagtttccagataatgatcagttctcaaacctcgaagctctgctagttcagcta
ggacctaaggagtgtgtgttgcccggaggagagaccgctggagagatgggaaagctgcga
caagtcattcagagaggaggaattctgattacagacagaaagaaggcagagttcacaaca
aaagatattgttcaggatctgaatcgcttattaaaatcaaagaaagaagaacaaatgaac
agtgcagcattgccagagatggaaaaacaggttgccatttcatctttgtcagccattatc
aagtttttagagttgctgtcagatgagtctaattttggacagtttgaactgactactttt
gatcttagtcagtatatggttcttgataatgcagctgtccaagccctcaaccttttccag
aattctttggaaaacgctaatactgcacagtcactagctggcttactaaataaatgcaga
actcctcaaggacaaaggctagttaatcagtggatcaaacaaccacttatggacaggaat
agaattgaagaaaggttggatttggttgaagcctttgtggtagatccagaactacgtcag
tgccttcaagaagatcttttacgtcgcttcccagatctcaaccggctagcaaagaaattt
cagagacaggcagcaaccttacaggactgttatcgaatgtatcaggcaattaatcaactc
cctaatgttgtacaagcactagaaaaacatgaaggagatcaccagatgttgttgttggca
gtgtttataacaccacttaatgatatcaactctgacttctctaagtttctggagatgata
gaaacaacattagacatggataaggtggagaatcatgaatttcttgtcaaggcttctttt
gatcctaacttgacagaattaagagagaagatgaatgagctggaggaaaacatgcagtcc
gttttgaagagtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactagag
tcaaattcgcagtttggacaccattttcgaatcacttgcaaggaggaaaaagttctccgg
aacaactccaagtacaagataatcgatacccagaagaatggcgtgaagtttactaacagc
aaactgagctccatcaatgaagaatatataaagaacagagaagaatatgaagaggctcag
gatgcaattgtcaaggaaatcattaacattgcttcaggttatgcagagccaattcagaca
atgaatgacgtgatagctcagttggatgcacttgtcagttttgctcatgtgtcaaacgga
gctccggtgccatacgtccgtcctgtcattctggagaagggacaaggaagaattgtgctg
aaaggctccaggcatccttgcatcgaagtgcaagatgacgtagccttcatccccaatgac
gttatgtttgagaaggacaaccagatgttccacattattactggtcctaacatgggagga
aagtcaacgtacatccgacagactggggtgatagttctcatggcccagattgggtgtttt
gtgccatgcgactctgcagaaataaccattgtggactgtattcttgctcgggtaggagct
ggagacagtcagctgaaaggtgtatctactttcatggctgaaatgttcgagactgcatca
atccttaggacagcatctgaaaactccctgataatcattgatgagctgggaagaggaact
tctacctatgatggctttggcttagcatgggctatttcagagtacattgctaccaaaatc
tgtgctttctgtatgtttgccacacattttcatgaactgacagcacttgctgaccaagtg
gccacagtcaataatcttcatgtcactgctctgactagtgatgacacactgacgatgctc
taccgtgtcaaggaaggtgtttgtgaccaaagttttggaatacatgtagcagagctggca
gcttttccaaaacatgtaatcgagaatgcaagagagaaggcattggagctggaggagttt
caaaacattggcaaatccaaggaatgtgaaggagaaccaccagtcaagaagccttacaga
gaaagagaggaaggcgaaaaaataattcaggattttctttgtcaattgaaagcattgccc
ctggcagatatgtcagaagaagacatcaaaaccaagctgaagcaactgaggaatgaagta
ttggcaaagaacaacagttttgtgaatgaaataatttcccgaacaaaagttacatcatga
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