Tinamus guttatus (white-throated tinamou): 104565425
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Entry
104565425 CDS
T08560
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03013
Nucleocytoplasmic transport
tgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104565425 (UPF3B)
03015 mRNA surveillance pathway
104565425 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104565425 (UPF3B)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104565425 (UPF3B)
mRNA cycle factors
P-body specific factors
104565425 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
Motif
Other DBs
NCBI-GeneID:
104565425
NCBI-ProteinID:
XP_010210427
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
KEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHK
GQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDEKLTSTPETLLE
EIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEEERRK
RKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLEKKEKSKKLEKETLREEKNA
SSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQREKLRRQEEERRRQK
ERFEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSNTDKPEKVTKDDKKEDTVKRDRI
RNKDRPAMQLYQPGARSRSRLCQYEDSAAKPTDQGADKKTENETSNTKEEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
aaggagcagctggaggagcacctgcagccgctgcccgagcacgactacttcgagttcttc
gccaacgactccagcctctacccgcacatgttttcgagagcctacatcaacttcaaaaac
caggaagacatagtcctcttcagggatcgctttgacggctatgtttttgtggatcacaag
ggtcaggaatatgcagccatagtagagtttgcacctttccaaaaagctgcaaaaaagaag
agtaagaaaaaggatgccaaaacggggaccattgaagacgatccagaatacaagaagttt
ctggaaagttacagtgcagatgatgaaaaattaacctcaactcctgaaactctactggaa
gaaatagaggcaagaaacaaagagctgatagctaagaagactactcccttactgaacttc
ctgaaaaataaacagaggctgagagaagaaaaaagagaggagaggaggaggagagaactg
gaaaggaaaagacaaagagaagaagaaagaagaaagtggaaggaggaggagagaaggaag
agaaaagaagcggaaaaactgaagaaggtagacagatgtccagaaaaagaaagggacaga
tcaaaagaagagccaaagattaagttacttaagaagcctgaaaaagatgaaaaagacttg
gagaaaaaagaaaaatccaagaaactggaaaaagagactctaagggaggaaaaaaatgcg
agtagtgcatctgccaaacgatctgatggggagacaaaagaagagaaggcaaaaaagtca
gaagatgagtgtgtaaaggactacagggaccgagatagagattttgaaagagacagagaa
tatgagagagcacagagggagaaactgagacgccaagaagaggagcgtcggaggcagaaa
gagcgctttgagaaagagaaggtttttagaagaaaagaggaagaggtgaaaaaggagaga
gacttgctcagagaaaagggaaagaaaagtgatctcacagactttaccagcaacacagac
aaacctgaaaaagtaaccaaagacgataaaaaagaggatacagttaagagggatcgtatc
agaaacaaggatcgtccagcaatgcagttgtaccagccgggagcccgaagccgaagcaga
ttgtgtcagtatgaagacagtgccgcaaagcccacagatcagggagcagataaaaaaaca
gagaatgagacgagtaatacgaaggaagaggagtga
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