Tinamus guttatus (white-throated tinamou): 104565513
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Entry
104565513 CDS
T08560
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104565513 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104565513 (WDR33)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104565513 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Collagen
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104565513
NCBI-ProteinID:
XP_010210510
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEGVQPPPPAGALHGPQPFPGQGPMAQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGAML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPSRGPHPSQGPLPFQQQKTPLLGD
GPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHSQGPGLNKGDSRGPPNHHMGPLSDRR
HDQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPDK
RFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDR
YPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDTFDSPDENARGRD
HGVRGRGRGALRGGRKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPANR
ERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPAGPPEERGKGRGGSGPSQRVPKSG
RSSSLDGDHHDGFHRDEAFGGGPPGGNNPSRGRSGSNWGRGSNMNSGQSRRGASRGGGRG
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccaccccgttttttccacatgccgaggttccagcaccag
gcgcctcggcagctgttctacaaaagacccgattttgcacagcagcaagcaatgcaacag
cttactttcgatggaaagcggatgagaaaagctgtgaaccggaaaaccatagactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagccggatgcagggtattataacgatttggtcccccctataggaatgttgaac
aaccctatgaatgctgtaacaacaaaatttgttcggacatctacgaacaaagtgaagtgc
cccgtatttgttgtcaggtggactcctgaagggaggcgcttggttactggggcatctagt
ggagagttcaccttgtggaatggactgactttcaactttgaaacgatattacaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaagtgcgttgactggcatccaacgaagggattggttgtc
tcgggaagtaaagatagccaacagcccataaagttctgggatccaaagactggccagagc
cttgccacactacatgcccataaaaacacagtgatggaggtaaaattgaacctgaatgga
aactggcttctgacggcttctcgtgaccacctctgcaagctcttcgacattcggaatttg
aaagaagaacttcaagtcttcaggggtcataagaaagaggccacagctgttgcctggcat
cccgttcacgaagggctgttcgccagcggaggctctgacggctctttgctgttctggcac
gttggggttgagaaggaggttggtggaatggaaatggctcacgagggaatgatctggagt
ctggcatggcatccccttggacatattctctgttcaggctcaaatgatcacaccagcaaa
ttttggactcgaaaccgacctggagataaaatgcgagatcgttacaacttgaatctgctg
cctggcatgtcagaggatggtgtggaatacgctccgggagatgatcttgaacccaacagc
ctagcagttattcctgggatgggaatacctgagcaattgaaaatagccatggagcaagag
cagatgggaaaagatgagtccaatgatattgaaatgactatccctggattggactgggga
atggaggaagtaatgcaaaaggaccaaaaaaaggtgccacagaaaaaagtgccctatgca
aaaccaataccagcacagtttcagcaggcgtggatgcagaataaagtccctttgcctccc
ccacctgagccattaaatgacagaaaggaagatattaagctggaggagaaaaagaagacg
caggcagagattgaacaggaaatggcagcacttcagtacacgaacccacagctcctggag
caactgaagatcgagagactcgcgcagaagcaagcggagggggtgcagccgccgccgccc
gcgggcgccctgcacggcccccagcccttcccagggcaaggcccgatggcgcagatgcct
caaggattccagcagcccctcccacctcagcagatgccaatgaatatgcctcaaatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcaa
ggccctccgttacaccaaggcggtgcaggtccacaagggttcatgggaccacagggacct
ccaggcccccaaggacctccacaaggaatgccacggcctcaggatttacatgggcatcaa
ggaatgcagagacatcctggccctcatgggccaatggggcctcccggtccacagggtagt
gctggcccacaaggccacttaggaccacaaggcctacctggatctcagactcatttagga
cctcagggtccacctggcccacaaggtcacttgggtcctcaaggtcctccaggtggccaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttcctcatggcatgcaa
ggagctccaggatctcaagggatgcaaggtcctatatctcaagggcctttgatgggactt
aatccaagagggatgcagggtccaccaggacccagagataaccagggacctactccacaa
gggatgatgatgggtcatccgcaagaaatgagaggtcctcatatgcaaagtggtttacta
ggacatggtccccaggagatgaggggcctacagggacccccgcctcaaggtgcaatgtta
ggaccgccacaagaattgcgtgggccgccaggtccgcaaggccagcagggacctccgcaa
ggctctttagtggggcctcaaggaaacatgcaaggacctcagggacagccttcaaggggg
ccacatccttcccagggccctctgcctttccagcagcagaaaactccgttgctgggcgat
gggcctcgtcccccattcaatcaggacggacagaacccaggtcctccaccgttaatacca
ggcctggggcagcagggaggacaaggtcgtctcggccctcacagccaaggacccggtctt
aataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagatagaagg
cacgaccagaacagtggtggtcctgatcatgggcctgagagagggttgtttcgaggtggc
caggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacctcaccca
gatttccatgatgactttgatcgaccagatgacttccgagatgacttccatccagataag
agatttggccatcgattacgggaatttgaggggagaggaggcccaccgttacaagacgaa
aaatggagacgcggtggacccgggcctccatttcctcctgatcacagggaatttgaagga
gggggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagatgataga
tatccacgggatcctgaggacgcacggttccggggaagacgcgacgagagcttcagaaga
ggaggaccctcaagacacgagggccggggacccagggggagagacggctttcctggtcct
gaagattttgggccagatgacacttttgactctcccgatgaaaacgcgagaggaagggac
cacggtgttcggggacgaggtcgtggtgctctcagaggaggccggaagggtctgcttcca
actccagatgaatttccacgttttgaaggaggacggaaaccagaatcctgggatggaaac
agagagccagggcctcgtccagatcaccctcctcatgatggacactctccagctaacaga
gaacgctcctcttcgctccagggcatggacatggcctcgctgcctccacgcaaacggccc
tggcatgatggaccaggcacctctgaccacagagagatggatgcacccgctgggcctccg
gaggagagagggaaaggacgaggaggttcaggaccttcgcagagagtgccaaaatccggg
aggtctagctccttggatggagaccatcacgatggattccacagggatgaagcttttggt
ggaggccctccaggaggcaataacccttccagaggaaggagcgggagtaactggggaaga
ggaagcaacatgaactctggtcagtcaagaagaggagcatctaggggtggtggaagagga
cgatag
DBGET
integrated database retrieval system
