Tinamus guttatus (white-throated tinamou): 104566070
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Entry
104566070 CDS
T08560
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104566070 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104566070 (POLR1A)
Enzymes [BR:
tgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104566070 (POLR1A)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104566070 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
104566070
NCBI-ProteinID:
XP_010211119
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MYSADEIRKLSVKAITNPQYLDNVGNPAVNGLYDLALGPPDSKEACATCMQTFSNCPGHF
GHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLLRSQLKVLERGLLHAVHDL
EVILNRFLEQNADATGLEIEEELNRHVHEILQNNQLGDQCSNVKNVCECKNKLISQFWKA
HMTSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYQKSGEEGSLEEPAVIDETQLGKRGYL
TPMTAKEYILSLWKNEGFFLRYLFPGMDNHGSTGFSPDLFFLDLLVVPPSRYRPINRLGD
RMFTNGQTVNLQAVMKDAQMIRKLLVFMAKEQCQPIKITENEIQTETGEPDEPVDRSVLS
MISGQTIADKLYNAWIRLQSHVNIVFDSDMDKLVTEKYPGIRQLLEKKEGLFRKHMMGKR
VDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASM
VINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCRHIKNGDXHRPSIQAHRA
RILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLASTDEQYLVPKDGKP
LPGLIQDHMISGVSMTIRSCFFTREQYMELVYRGLTDKKGRIKIFPPAIMKPQQLWTGKQ
VVSTLLINIIPENQIPLNLTGKAKIGGKAWVKGPAKRCLETNLDSMCESQVIIRNGELLC
GVLDKAHFGSSAYGLVHCCYEVYGGETSGKVLTCLGRLFTAYLQLYRGFTMGIEDILVKP
EADRERQKIIEKSTHCGIEAVRAALNLPETASCDEVQGKWQDAHLCKDQRDFNMVDLKFK
EEVNNYNNQVNKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRP
PLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPSEFFFHCMAGREGLVDTAVKTSRSG
YLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIAENYEV
IQKTNHLDEALAKMESHQANQQFKAIKKWRARHQQTPVQREGGFLLYSQKKMARIKAQIP
AGASKNGRDPATLQLLKMWYELDEKKRRKYQKKTTKCPDPSLSVWRPDTYFASVSETFEN
GVDNYIKKWKSENQGCYTQPAFSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQ
MTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKAHKKVKQLKKRL
TRVCLAEVLQKVEMEESLHLREKHNKHRLYKIKFHFLPHECYREEKCVKPKDILYFMETR
FFKILLETIKKKSAKLESFTEVSARKATRKDLDGDHDQVLNNQEAPEDEEKIVDAEADEG
DGDATEAKRRKKQEEEVDYESEEENGDEQAGENPEEEEAESEKEERPQTAEGGDQNGAEG
DDSQHLSFMSQKKKERDRIVKSAALRVNAVLSSHPSVQDYTFDTENELWCEVSLTLPLMK
VYFDLTSLLVTLARNTVIHEIKGITRCLLNENTNSEGEKELVLHTEGINLAELFRYSDVL
DLNRLYSNDIHAMAKNYGVESALRVIIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGIYK
PLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAYDELRSPSACLVVGKVVKGGTGLFDL
KQPLT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggctgacgagatcaggaaactcagtgtaaaagccataacaaaccctcagtat
ttggataatgtggggaatccagctgttaatggactgtatgacctggctttgggacctcca
gactccaaagaagcatgtgcaacttgcatgcagaccttcagcaactgcccggggcacttt
ggccacatagaactacccctcactgtctataaccctctgttttttgataaattatacctt
ctaattcgcggttcttgtttgaactgtcacatgctgacgtgtactcgagctgtggttcac
ttgctgcgaagtcagctgaaggttctggagagagggttgcttcatgcagtccatgacctt
gaagtcatcctgaacaggtttctagagcaaaatgcagatgcaacaggcctagaaattgaa
gaagagttaaatcgccatgttcatgaaatactacaaaataatcaactaggagatcaatgt
tccaatgtaaaaaatgtatgtgaatgcaagaataaactgatatcacagttctggaaagca
catatgacttcaaaaaaatgtccaaactgcaaatctaggagatcactagtgcgaaaagag
cataacagcaagctgacagtaacctatccttccacagtatatcagaagtcaggagaggaa
ggcagcctagaagagccagcagttattgatgaaacccagttaggcaagagaggatatcta
accccaatgactgccaaagagtacatcctgtctctgtggaagaatgaaggtttctttttg
cgttatctcttccctggtatggataatcatggcagtacaggattcagtccagatctgttt
tttttagatcttcttgtggttccaccttcaaggtaccgtcccataaatcgtctcggagat
cggatgttcacaaatgggcagactgtgaacctgcaggctgtcatgaaagatgcacaaatg
atacggaagctcttggttttcatggcaaaagaacaatgtcagccaataaaaataacagaa
aatgaaatccaaacagagacaggtgagcctgatgagcctgtggaccgttctgtcctgtcc
atgatttcgggacagaccattgcagataagctgtacaatgcttggattcgtcttcagagc
catgtcaacattgtgtttgatagtgacatggacaagctagtgacagaaaaataccctggg
attcgtcagctattagagaaaaaggaaggtctgtttcgcaagcatatgatgggaaaacgt
gtggactatgctgctcgatccgtcatttgccctgatatgtacattggtacgaatgagatt
ggcattcccatggtatttgctaccaaactgacttaccctcagccagtcactccctggaat
gtcaaggagctgaggcaggctgtcattaatggcccaaaggttcatcctggggcctccatg
gtcattaatgaagatggatctcgtacagtgttgagtgccagtagcctgacccagagggaa
gccatagctaagcagctccttactccttcctcaggtgctccccagtcaggattgaagatt
gtgtgtcgtcatattaaaaacggagacngtcacagaccctccatccaggctcaccgggcc
aggatcctgcccggagagaaggtgctgaggcttcactacgccaactgcaaggcctacaat
gccgacttcgacggcgacgagatgaacgcccattttccccagagcgagctgggcagagcc
gaggcctacaccttagcctccacggacgagcagtacctggttccaaaggatggcaaacca
cttcctggcttgatccaagatcacatgatttctggtgtcagcatgacaatccggagctgc
tttttcacacgggagcaatatatggagcttgtttaccgaggcctaacagacaaaaaggga
agaattaaaatctttccacctgccattatgaagccacagcaattatggacaggaaagcag
gttgtttctacattgttaataaacattattccagaaaaccagatcccactgaatttgact
gggaaagctaagattggtggaaaagcctgggtgaaagggcctgcaaaaagatgtttggaa
actaatcttgattcaatgtgtgaatctcaggttattattaggaacggggagttgctgtgt
ggagtcttggacaaagctcacttcggcagctctgcctacggcctcgtccactgttgctac
gaagtctacgggggggaaactagtgggaaagtgctaacgtgtctgggacgcctcttcact
gcttatctgcagctctacaggggatttacaatggggattgaagatatcttggttaaacct
gaagcagaccgcgaaagacaaaaaattattgaaaaatcaactcattgtggtattgaagct
gtgagagctgcgcttaatttgccagaaacagcatcatgtgatgaggtccaagggaaatgg
caggatgcccatctctgcaaagaccagagggattttaacatggttgatctgaaattcaag
gaggaagtaaacaattacaacaatcaagttaacaaggtttgtatgcctcttggtctccat
aggagctttccagagaacaatttgcagttgatggtgcagtcgggagccaaaggatctact
gtaaatacgatgcagatttcctgtttgctgggccagattgagctggaaggtcgaaggccc
ccactgatggcatctggcaaatcgctgccgtgtttccagccgtacgatttttccccaagc
tcagggggatttgtgaccggcagatttctcactgggatcagaccctctgaattcttcttt
cactgcatggctggcagggagggtcttgtggatacagctgtcaaaaccagccgatctgga
taccttcaaaggtgtatcataaagcatctggaagggctggtggttcagtatgacctcact
gtacgtgacagcgatggcagcgtggtgcagtttctgtatggagaagatggccttgatatc
cccaaaactcagttcctgcaaccggagcagtttcctttcattgctgagaactatgaggtg
atccaaaaaacaaaccatctggatgaagctttagcaaagatggagtctcaccaagctaac
caacagttcaaagccatcaaaaagtggcgagccaggcaccagcaaacccctgtgcaaaga
gaaggaggttttctgttgtattcccagaagaaaatggcgaggataaaagcacagattcct
gctggagccagcaaaaatggaagagatcctgctactttacagttattaaagatgtggtat
gaactagatgagaagaaacgaaggaaatatcaaaagaagacaactaagtgtcctgatcca
agcctttctgtctggcgtccagatacttactttgcatccgtttcagaaacgtttgaaaat
ggagtcgacaattacatcaagaaatggaaatctgagaaccaagggtgctacacgcaacca
gcattttcttctgataggttaaaggatttgttgtatttaaagtggcaacgatccctatgt
gacccaggagaagccgtgggtctccttgcagcccagagtattggggagccttccacacag
atgactttgaacactttccactttgctggcagaggtgaaatgaacgtcacgttgggcatt
ccaaggttgcgggagatattgatggtagccagtgcaaatattaaaacaccaatgatgagt
gtccctgtgttaaataccaagaaagctcacaagaaggtgaaacagcttaagaagaggctg
acaagagtgtgcttagctgaggtcttgcagaaagttgagatggaggaatctctgcacttg
agggagaagcataacaaacatcgcctctacaaaatcaaattccatttcttgccccatgaa
tgttaccgagaggagaaatgtgtgaagcccaaggacatcttgtacttcatggaaacaaga
ttctttaaaatcttgctggaaacgattaaaaagaagagtgcaaagctggaatctttcact
gaagttagtgcccggaaagcaactcggaaggatttagatggtgaccatgaccaggtatta
aataatcaggaagctccagaagatgaagaaaagattgttgatgcagaagctgatgaagga
gatggtgatgctacagaagcaaagcggaggaagaaacaggaagaagaggttgattatgag
agcgaagaagagaatggggatgaacaggctggtgagaacccagaagaggaggaggctgaa
tcagagaaagaagaaaggcctcaaactgctgaaggaggagatcaaaatggagcagagggt
gatgattctcaacatctttcctttatgtctcagaagaaaaaggagagggatcgaatagtt
aaatcagcggcgttacgagtaaatgctgtcctgagcagccacccatcagtacaggattac
acatttgatacagaaaatgaactctggtgtgaggtttccctgacccttcctttgatgaag
gtgtacttcgacctcacctccttgctggtgactcttgcccgaaacacagttattcatgag
ataaaggggatcacacgatgcttgctgaatgaaaacaccaatagtgaaggagagaaggag
cttgttttacatactgaagggataaaccttgcagaactcttcagatactctgatgttttg
gacttgaacagactttattccaatgatattcatgccatggctaagaattatggtgttgag
tcagccctgagggttattataaaggaaataaaagatgtgtttgctgtatatggcattgtg
gtagaccctcggcacctttccctggtggcagattacatgtgttttgaaggaatttataaa
ccactgaatcgttttggaattcagtccaactcttcccctctgcaacagatgacgtttgaa
accagctacaaattcttgaaggaagcaacaatgatgggtgcctatgatgaactgaggtct
ccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttgtttgacctc
aagcaacctcttacataa
DBGET
integrated database retrieval system
