Tinamus guttatus (white-throated tinamou): 104566557
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Entry
104566557 CDS
T08560
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgt03000
]
104566557 (RC3H1)
04121 Ubiquitin system [BR:
tgt04121
]
104566557 (RC3H1)
Transcription factors [BR:
tgt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104566557 (RC3H1)
Ubiquitin system [BR:
tgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104566557 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104566557
NCBI-ProteinID:
XP_010211653
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSDE
GGVDLPNRKTSVLPNGIVSTGSTVTQLISRGTDSSYETALKPGKMDHLSSSAPGSPPELL
ESVSKSSISALPVNPHPGPARAPTDLPSVSVTKQLQIVPRGSQLYNNQQADIFYQDPRGA
APPFEPAPYQQGVYYPTQSSQCMSRFVRPPPSAPEPGPPYLDHYPTYLQDRVVSPQYTQP
QQYPPMGQPIYPPHYDTRRVYPPVQPYQQEEIVRGNPVPIEIPQAAVPSYIPESRDRYQQ
VEGYCSMAPHLSQIRPPCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPF
HSEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSK
AMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQSSGPMQAMAVQGAST
KSIISDYSPYGTHGGWGASPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQL
RMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSL
ELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALTFSSDV
PNGSALTQENISLLSNKTSSLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggattttctgtcctgcccaatttgcacacagacg
ttcgacgaaacgatccggaagcccatcagcttgggttgcggccacactgtctgcaagatg
tgcctcaacaagctccatcgcaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaattcagccttgctgcaacttgtgggtgctcaggttccagag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattggcattgtacctcaaaccactcagcagtgccagaggtgtgggt
cttaacagtactactcagagtgtgctaagtcgtcccatgcaaaggaagcttgtgacatta
gttcattgccaactggttgaggaagagggacgcatccgagccatgcgtgcagcacggtcg
cttggtgaaagaaccgttacagagctcatcctgcagcaccagaacccgcagcagctctct
tccaacctctgggctgccgtgagagccagaggctgccagttccttgggccagcaatgcaa
gaggaagctttaaagctggttctgctggctctggaagatggatcggctttgtcacggaag
gttttggttctctttgtggttcagaggttggagccacgatttcctcaggcttctaaaact
agcattggacatgttgtccagcttctttacagagcctcgtgcttcaaggtgacaaagcgt
gatgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctcttaga
agggaacatgattcccagatagttcaaattgctatggaagcaggtttacgcattgcaccg
gatcagtggtcctcactgttatatggagaccaatctcacaaatctcacatgcagtctatt
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattgactattgct
ctccagaggactggagatccagctaacctgaatcgtcttcgacctcacctggaactcctg
gcaaatatcgatcccagtccagatgctccacctccaacatgggaacaactggaaaatggg
ctagttgctgtgagaactgtggttcatggcttagtagattatattcagaatcacagcaag
aaaggaacggaccagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaagcagagaggagggtgcccccgaggggctagctgcacctttgcacattcgcag
gaggaactggaaaaatttcgcaaaatgaacaagcgtctggttccccgaagaccgctgagt
gcctctttgggccagctgaatgaggtgggcctgccttcaggagctatcctctcggatgaa
gggggagtggacttgcccaacaggaaaacctctgtcctgccaaacggaattgtgtcaaca
ggcagcaccgtgacacagctcatttcccgagggactgactccagttacgaaacagccctg
aagccagggaagatggaccacctgagtagcagtgccccaggatccccacctgaattgttg
gaatctgtctccaagagctctatttctgccttaccagtgaaccctcatcctgggcctgct
cgggcaccaacagatttgccttcggtgtcagtcaccaagcagttacaaattgtaccacga
ggctcccagttgtataataaccagcaagcagatatcttttatcaagatcctagaggcgct
gcccctccatttgagccagcaccctatcagcaaggagtttactatcctactcagtcttca
cagtgcatgtctcgctttgtccgacctcctccatcagctcctgagcctggtccaccttat
ttagaccattacccaacttaccttcaggaccgtgtggtgagcccgcagtacacgcagccg
cagcagtaccctcctatggggcagcccatatatccacctcactacgacacccgtcgcgtc
tatccccctgtccagccatatcagcaagaggaaattgtccgaggaaacccggtaccaatt
gaaattccacaggcagctgtaccctcctacatacctgaatccagggacagataccagcaa
gtggagggttattgctccatggctccacatctcagtcagatcagacctccatgccacaga
cctcatcccagcctggatgaacttcaccgccgaaggaaggagatcatggctcagctagag
gagaggaaggtgatttctccccctccttttgcgccttcaccaaccttgcctcatcctttc
cattcagaggagtacttggatgaagacctgaaggtagctgggaaatataaaggaaacgac
tatagccagtactctccctggtcatgtgacaccatcggctcctacattggaaccaaagat
gcaaaacccaaagatgttgtggcagcaaggagcgtggaaatggcgaacgtagatagtaaa
gctatgcgtgaccagcgattggacatgcagagaagggcagcagagactggtgatgatgat
cttattccatttggagaccgaccaactgtgtcaagatttggggctatctctcgtacctcc
aaagcaatgtaccagagttctggtcccatgcaggccatggcggttcagggagcttccacc
aaatctatcatttcagactacagtccttatggaactcatggtggctggggtgcctctcca
tactctcctcatcaaaatataccttctcagggacgtttcaatgacagggaaagactgtcc
atgtcagatgtggctggtcatgggaagcagttaccctcagctgagcgggaacagcaactg
cggatggagctgcagcaagtagaccatcagatcagccagcagacacaaatgcgaggacta
gaggctgttagtaacaggctgctgttgcagagggaggcgactaccctggcaggccagcca
cagcccccacccccacctcccaagtggcctgggatgatctcaagtgagcagctgagcttg
gagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagcatggagagc
cagtcttcactggatataaaaaacaaactgggcaccactaagcagacagaaaatggacaa
ttagaaccgcaaagcaaggttccagctgaggacctcgcactgacattcagcagtgatgtt
ccaaatggatcagccttgacacaagagaacatcagccttctgtcaaacaagacatcgtct
ctgagcctgtcggaggacccggagggcggaggagacaaccatgactcccagagagcagga
gttacacccacatctgctccctga
DBGET
integrated database retrieval system
