Tinamus guttatus (white-throated tinamou): 104566563
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Entry
104566563 CDS
T08560
Symbol
SMG7
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7
KO
K14409
protein SMG7
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104566563 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104566563 (SMG7)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104566563 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104566563 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104566563
NCBI-ProteinID:
XP_010211664
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSNSNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFLTEIPELILEDPSEAKESLTLQETPIAEPLSTDGSPGLKSVLSTGRSLNNNCDAG
EKPMVTFKENIKPREVNREQGRTYPPKXRDYSKGIVATKNDGKKDNNKRKNETKKCSLDK
MQEAGKQNVAVQVKSQTEMRKTPVSEVRKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRP
GFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPAAHSPAGNQVQAGKQSHIPYSQQR
PSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSAGQLQVQALAQQQQSPTKAVQGLGKSP
PHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQ
QPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSSMDRRGKRQGVFRPE
QDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLF
KSLLEKPSELMSQSSSFLSLSGFSLNQERYPNSSMFNEVYGKNMNTSTKTEVAPSVAHQE
TSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGT
SDNRDRRIADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWAAQGPPMEDSSA
VLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaatcagagatacccttgaggcaggcagaagtcctgaaggctgacatgaca
gattcaaagcttggtccagcagaagtctggacatccagacaggctctacaggacttatat
cagaaaatgctagtgactgatttggaatatgctttagataaaaaggtggagcaggacctt
tggaatcatgcctttaaaaatcagatcactacgctacagggtcaagcgaaaaatagagcc
aatccgaatcggagcgaagttcaggcgaacctttctctgttcttagaggcagctagtggc
ttctacacgcagttattacaggaattgtgcacagtttttaatgtagacttgccatgtcgt
gtgaagtcttcccagctgggaatcattagcaataaacagatgcacaccagcgctattgtg
aagccgcagtccagctcctgctcttacatctgccagcactgccttgtccacctgggagat
atcgctcgctataggaatcagaccagccaggcagagtcttactacagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctatcctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagtattgctgtgaagtttcctttccca
gctgcctccactaatttacaaaaagcactttctaaagcactggagagtcgtgacgaggtg
aagactcgatggagtgtgtcggacttcatcaaggcatttattaaattccatggtcatgtg
tacctgagtaagagcttggagaagctatcccctcttcgggaaaagctggaagagcagttc
aagaggttgttattccaaaaggccttcaattctcagcagttagtccatattactgttatc
aacctgttccaactccatcacctgcgagatttcagcaacgagacagagcagcacagctac
agccaggatgaacagctctgctggacacagttactggctctcttcatgtcctttcttgga
gttctctgcaagtgtcctttacagaatgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtgtcaatggactggctgaaacttagacccagtgttttccaggag
gcagtagttgatgaaagacggtacatatggccctggctgatttctcttctaaacagtttc
cagccccatgaagaagatctatccaatagtaatgcaaccccccttccagaagaatttgag
ttgcaagggttcctggccctgagaccttcattcaggaacttggatttttcaaaaggccac
caggcaattacaggggataaggaagggcagcaacgtaggatacggcaacagcgtctgatc
ttcaccggcaaatggattgctgataaccagccaaggttaattcagtgtgaaaatgaggtg
ggaaagctgttgtttttgacagaaatcccggaattaatactagaggatcctagtgaagcc
aaagagagtctcaccttgcaggagacacctattgcggagccactatccacagatggaagc
cctggactcaaatcggttctgtcgacgggcagaagtctaaacaacaactgcgatgcagga
gaaaaaccaatggtcacgttcaaagagaacattaagccacgggaagtaaacagagagcaa
gggcgaacctatcctcctaaanngagagactatagcaaaggaatagtagccaccaagaat
gatgggaagaaggataacaataaaagaaagaatgagaccaagaaatgcagcttggataaa
atgcaggaagcaggaaagcagaatgtggcagttcaggtgaagtcccagacggagatgagg
aagactccagtgtctgaagtcaggaaaacgcctgtaactcagactccaagtcaggccagc
agttcccagttcatccccattcatcacccaggagccttccctcccctgccgagccggcca
ggattcccacctccgacgtacgttgtccccccacctgtggctttctccatgagcacggga
tacaccttcccaggcggcgtttccgtcccaggaaccttcctccagcccgccgcgcactca
cctgcaggcaaccaggtgcaagcagggaaacagtcccacattccctacagccagcagcgg
ccctccggaccggggcctatgacccagggacctcagcaaacgccacctccctcccagcaa
cccctctcctcgttaccagctcaggcgacagcacagtctgcgggccagctacaggtgcaa
gcgctggcccagcagcaacagtcccccacgaaggctgtgcagggccttgggaagagcccc
ccgcaccactcggggttccagcagtacccccagacagactcgtcaaagcagctctggaac
cctcctcaagtccaaggctcactggggaagatcatgcctgtaaagcagtcctattacctt
caggcccaggaccctctaaaattatttgaacagtcattacagcctcctgtgatgcaacag
cagcctctggagaaaaaaatgaagccttttccaatggagccatataaccagaacccctca
gaagtcaaggtgccagagtattactgggactcttcctacggcatggctgataacagggtg
atggcacagcagtccagcatggaccgcaggggaaaacggcaaggagtcttccgcccagaa
caagatgctgtctccaggatgacctttgaggaccccaagagctcccctctgcttcctccg
gacctgttaaagagtctggctgccttggaggaggaggaagagctgattttctctaatcct
cctgatctttacccagctctgctggggcctctcgcctctcttcctggacgaagcctcttt
aagtccttgctggaaaaaccatcagaactgatgtcccagtcgtcatctttcctgtccctc
agtggcttttcccttaatcaggaaagatacccaaatagcagcatgttcaacgaggtatat
gggaaaaacatgaataccagcacaaaaacagaagtcgccccttcagtcgcccatcaggag
acttcactctattctctctttgaagggactccgtggtctccatcccttccagccagctca
gatcattcgacaccagccagccagtctcctcactcctctaaccccagcagcttgccaagc
tcccctccaacccataaccacaattctgttcccttctccaactttggacccattgggact
tcagacaaccgagacaggagaatcgcagaccgctggaaaacggataaaccagcaatggga
ggatttggtctggattatctcccagcaacatcctcgtcttcagagagcagctggcaccag
tccagcactcccagtggcacctgggcagcccagggtccccctatggaggactcctcagct
gtgctcatggagagcttgaagtccatctggtccagctccatgatgcatcctggcccttca
gccctggagcagctgttaatgcagcagaagcagaagcagcaacgtggacaaggcgccatg
aacccgccgcattga
DBGET
integrated database retrieval system
